myRT

myRT report for GCA_014212175.1_ASM1421217v1

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Seq: JACJVR010000121.1 Cohnella xylanilytica strain DSM 25239 contig_121, whole genome shotgun sequence (21412 bp)
Overview 1 RT 1: 1-3806 bp Neighborhood of RT #1 [1, 3817] RVT-UG2 BaeS Feature: gene Location: 1-870 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 22-583 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 22-583 bp Feature: gene Location: 900-1070 bp Feature: gene Location: 1670-3817 bp Feature: domain Description: BaeS Location: 2684-3806 bp Feature: domain Description: BaeS Location: 2684-3806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, BaeS (COG0642)

Seq: JACJVR010000021.1 Cohnella xylanilytica strain DSM 25239 contig_21, whole genome shotgun sequence (1795 bp)
Overview 1 RT 1: 1-1793 bp Neighborhood of RT #1 [1, 1793] RVT-GII GIIM Feature: gene Location: 1-1275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-934 bp Feature: domain Description: GIIM Note: maturase Location: 1048-1231 bp Feature: domain Description: GIIM Note: maturase Location: 1048-12 31 bp Feature: gene Location: 1635-1793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACJVR010000033.1 Cohnella xylanilytica strain DSM 25239 contig_33, whole genome shotgun sequence (7616 bp)
Overview 1 RT 1: 3135-7569 bp Neighborhood of RT #1 [3135, 7569] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3135-3692 bp Feature: gene Location: 3927-4154 bp Feature: gene Location: 4271-6103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4547-5384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4547-53 84 bp Feature: domain Description: Intron_maturas2 Location: 5438-5726 bp Feature: domain Description: Intron_maturas2 Location: 543 8-5726 bp Feature: domain Description: HNHc Note: nucleases Location: 5927-6074 bp Feature: domain Description: HNHc Note: nucleases Location: 5927-6074 bp Feature: gene Location: 6451-7569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)