myRT

myRT report for GCA_014212225.1_ASM1421222v1

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Seq: JACKWH010000002.1 Enterococcus faecalis strain EFs17-1 EFs17-1-2, whole genome shotgun sequence (94113 bp)
Overview 1 RT 1: 35293-41069 bp Neighborhood of RT #1 [35293, 41092] Omega_Repress PRK07726 RVT-GII HNHc PRK07726 PinE Feature: gene Location: 35293-35562 bp Feature: domain Description: Omega_Repress Location: 35296-35506 bp Feature: domain Description: Omega_Repress Location: 35296-35506 bp Feature: gene Location: 35696-37384 bp Feature: domain Description: PRK07726 Location: 35699-37232 bp Feature: domain Description: PRK07726 Location: 35699-37232 bp Feature: gene Location: 37625-39511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37940-38678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37940-38678 bp Feature: domain Description: HNHc Note: nucleases Location: 39230-39395 bp Feature: domain Description: HNHc Note: nucleases Location: 39230-39395 bp Feature: gene Location: 40248-40610 bp Feature: domain Description: PRK07726 Location: 40257-40590 bp Feature: domain Description: PRK07726 Location: 40257-40590 bp Feature: gene Location: 40610-41092 bp Feature: domain Description: PinE Location: 40640-41069 bp Feature: domain Description: PinE Location: 40640-41 069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Omega_Repress (pfam07764), PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), PinE (COG1961)

Seq: JACKWH010000004.1 Enterococcus faecalis strain EFs17-1 EFs17-1-4, whole genome shotgun sequence (36331 bp)
Overview 1 RT 1: 3119-7508 bp Neighborhood of RT #1 [3119, 8065] SR_ResInv HTH_Hin_like RVT-Retrons PemK_toxin Relaxase Feature: gene Location: 3119-3895 bp Feature: gene Location: 3929-4507 bp Feature: domain Description: SR_ResInv Location: 3935-4307 bp Feature: domain Description: SR_ResInv Location: 3935-4307 bp Feature: domain Description: HTH_Hin_like Location: 4349-4466 bp Feature: domain Description: HTH_Hin_like Location: 4349-4466 bp Feature: gene Location: 5277-6242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5412-5967 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5412 -5967 bp Feature: gene Location: 6348-6713 bp Feature: domain Description: PemK_toxin Location: 6375-6702 bp Feature: domain Description: PemK_toxin Location: 6375-6702 bp Feature: gene Location: 6764-8065 bp Feature: domain Description: Relaxase Location: 6803-7508 bp Feature: domain Description: Relaxase Location: 6803-7508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), HTH_Hin_like (cd00569), RVT-Retrons, PemK_toxin (pfam02452), Relaxase (pfam03432)