myRT

myRT report for GCA_014212415.1_ASM1421241v1

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Seq: JACKWX010000001.1 Clostridium algidicarnis strain CM002 contig00001, whole genome shotgun sequence (493744 bp)
Overview 1 RT 1: 490610-493694 bp Neighborhood of RT #1 [490610, 493741] DUF3307 SatD RVT-GII Feature: gene Location: 490610-491356 bp Feature: domain Description: DUF3307 Location: 490625-490958 bp Feature: domain Description: DUF3307 Location: 490625-490958 bp Feature: gene Location: 491349-492038 bp Feature: domain Description: SatD Location: 491379-491964 bp Feature: domain Description: SatD Location: 491 379-491 964 bp Feature: gene Location: 493025-493741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493082-493694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493082-493694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3307 (pfam11750), SatD (pfam16264), RVT-GII

Seq: JACKWX010000002.1 Clostridium algidicarnis strain CM002 contig00002, whole genome shotgun sequence (308691 bp)
Overview 1 RT 1: 111021-117532 bp Neighborhood of RT #1 [111021, 117540] Uup LAGLIDADG_3 RVT-GII GIIM smpB DltE Feature: gene Location: 111021-112787 bp Feature: domain Description: Uup Location: 111042-112611 bp Feature: domain Description: Uup Location: 111042 -112 611 bp Feature: gene Location: 112972-113400 bp Feature: domain Description: LAGLIDADG_3 Location: 112987-113221 bp Feature: domain Description: LAGLIDADG_3 Location: 112 987-1132 2 1 bp Feature: gene Location: 113471-114877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113822-114440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11382 2 -114440 bp Feature: domain Description: GIIM Note: maturase Location: 114491-114722 bp Feature: domain Description: GIIM Note: maturase Location: 114491-11472 2 bp Feature: gene Location: 116234-116701 bp Feature: domain Description: smpB Location: 116252-116690 bp Feature: domain Description: smpB Location: 1162 52 -116690 bp Feature: gene Location: 116752-117540 bp Feature: domain Description: DltE Location: 116776-117532 bp Feature: domain Description: DltE Location: 116776-117532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uup (COG0488), LAGLIDADG_3 (pfam14528), RVT-GII, GIIM (pfam08388), smpB (TIGR00086), DltE (COG3967)

Seq: JACKWX010000020.1 Clostridium algidicarnis strain CM002 contig00020, whole genome shotgun sequence (21995 bp)
Overview 1 RT 1: 13936-18096 bp Neighborhood of RT #1 [13936, 18134] RVT-GII GIIM ParE_toxin PhdYeFM_antitox Feature: gene Location: 13936-15594 bp Feature: gene Location: 16192-16467 bp Feature: gene Location: 16760-17350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16766-16904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16766-16904 bp Feature: domain Description: GIIM Note: maturase Location: 16961-17189 bp Feature: domain Description: GIIM Note: maturase Location: 16961-17189 bp Feature: gene Location: 17482-17796 bp Feature: domain Description: ParE_toxin Location: 17500-17782 bp Feature: domain Description: ParE_toxin Location: 17500-17782 bp Feature: gene Location: 17841-18134 bp Feature: domain Description: PhdYeFM_antitox Location: 17931-18096 bp Feature: domain Description: PhdYeFM_antitox Location: 1793 1-18096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ParE_toxin (pfam05016), PhdYeFM_antitox (pfam02604)