myRT

myRT report for GCA_014218805.1_ASM1421880v1

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Seq: JACJUV010000001.1 Teredinibacter franksiae strain Bsc2 2531935474, whole genome shotgun sequence (4223372 bp)
Overview 1 RT 1: 624506-629446 bp 2 RT 2: 1030047-1036509 bp 3 RT 3: 1038633-1041592 bp 4 RT 4: 2528985-2532144 bp 5 RT 5: 3099022-3103326 bp 6 RT 6: 3193852-3204528 bp Neighborhood of RT #1 [624506, 629472] Lipase_3 RVT-GII HTH_MlrA-like_sg2 Neighborhood of RT #2 [1030047, 1036509] PhdYeFM_antitox YoeB_toxin RVT-GII DUF805 Cys_rich_CPCC RVT-GII GIIM Neighborhood of RT #3 [1038633, 1041592] RVT-GII GIIM Neighborhood of RT #4 [2528985, 2532144] RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #5 [3099022, 3103331] RVT-GII GIIM DUF772 Neighborhood of RT #6 [3193852, 3204528] COG3666 DDE_Tnp_1_6 RVT-GII GIIM RVT-GII GIIM RimL cxxc_20_cxxc RVT-GII GIIM Feature: gene Location: 624506-625258 bp Feature: gene Location: 625284-626198 bp Feature: domain Description: Lipase_3 Location: 625572-626172 bp Feature: domain Description: Lipase_3 Location: 625572-6261 72 bp Feature: gene Location: 626349-627821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626757-627447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626757-627447 bp Feature: gene Location: 628626-628898 bp Feature: gene Location: 629113-629472 bp Feature: domain Description: HTH_MlrA-like_sg2 Location: 629170-629446 bp Feature: domain Description: HTH_MlrA-like_sg2 Location: 6291 70-629446 bp Feature: gene Location: 1030047-1030319 bp Feature: domain Description: PhdYeFM_antitox Location: 1030050-1030245 bp Feature: domain Description: PhdYeFM_antitox Location: 1 030050-1 030245 bp Feature: gene Location: 1030300-1030569 bp Feature: domain Description: YoeB_toxin Location: 1030318-1030558 bp Feature: domain Description: YoeB_toxin Location: 1 03031 8-1 030558 bp Feature: gene Location: 1030831-1032234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031209-1031887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 209-1 031 887 bp Feature: gene Location: 1032750-1032893 bp Feature: gene Location: 1033224-1033715 bp Feature: domain Description: DUF805 Location: 1033395-1033677 bp Feature: domain Description: DUF805 Location: 1 033395-1 033677 bp Feature: gene Location: 1033816-1034145 bp Feature: domain Description: Cys_rich_CPCC Location: 1033897-1034110 bp Feature: domain Description: Cys_rich_CPCC Location: 1 033897-1 0341 1 0 bp Feature: gene Location: 1034269-1035558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034524-1035193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 034524-1 0351 93 bp Feature: domain Description: GIIM Note: maturase Location: 1035259-1035478 bp Feature: domain Description: GIIM Note: maturase Location: 1 035259-1 035478 bp Feature: gene Location: 1035782-1036177 bp Feature: gene Location: 1036267-1036509 bp Feature: gene Location: 1038633-1038824 bp Feature: gene Location: 1038830-1039060 bp Feature: gene Location: 1039067-1040356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039322-1039991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 039322-1 039991 bp Feature: domain Description: GIIM Note: maturase Location: 1040057-1040276 bp Feature: domain Description: GIIM Note: maturase Location: 1 040057-1 040276 bp Feature: gene Location: 1040580-1040960 bp Feature: gene Location: 1041026-1041592 bp Feature: gene Location: 2528985-2529326 bp Feature: gene Location: 2529383-2529643 bp Feature: gene Location: 2529773-2530957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2529923-2530592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2529923-2530592 bp Feature: domain Description: GIIM Note: maturase Location: 2530658-2530877 bp Feature: domain Description: GIIM Note: maturase Location: 2530658-2530877 bp Feature: gene Location: 2530970-2531740 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2530979-2531588 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2530979-2531 588 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2531609-2531723 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2531 609-2531 723 bp Feature: gene Location: 2531824-2532144 bp Feature: gene Location: 3099022-3099843 bp Feature: gene Location: 3100092-3100424 bp Feature: gene Location: 3100648-3101937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100903-3101572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 00903-31 01 572 bp Feature: domain Description: GIIM Note: maturase Location: 3101638-3101857 bp Feature: domain Description: GIIM Note: maturase Location: 31 01 638-31 01 857 bp Feature: gene Location: 3101944-3102786 bp Feature: gene Location: 3102969-3103331 bp Feature: domain Description: DUF772 Location: 3103164-3103326 bp Feature: domain Description: DUF772 Location: 31 031 64-31 03326 bp Feature: gene Location: 3193852-3195372 bp Feature: domain Description: COG3666 Location: 3193981-3194320 bp Feature: domain Description: COG3666 Location: 31 93981 -31 94320 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3194959-3195343 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 31 94959-31 95343 bp Feature: gene Location: 3195490-3195861 bp Feature: gene Location: 3196085-3197374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3196340-3197009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 96340-31 97009 bp Feature: domain Description: GIIM Note: maturase Location: 3197075-3197294 bp Feature: domain Description: GIIM Note: maturase Location: 31 97075-31 97294 bp Feature: gene Location: 3197515-3197862 bp Feature: gene Location: 3197981-3198352 bp Feature: gene Location: 3198450-3199757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3198678-3199293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 98678-31 99293 bp Feature: domain Description: GIIM Note: maturase Location: 3199338-3199542 bp Feature: domain Description: GIIM Note: maturase Location: 31 99338-31 99542 bp Feature: gene Location: 3200235-3200417 bp Feature: gene Location: 3200507-3200998 bp Feature: domain Description: RimL Location: 3200513-3200987 bp Feature: domain Description: RimL Location: 320051 3-3200987 bp Feature: gene Location: 3201112-3201429 bp Feature: domain Description: cxxc_20_cxxc Location: 3201139-3201382 bp Feature: domain Description: cxxc_20_cxxc Location: 3201 1 39-3201 382 bp Feature: gene Location: 3201500-3201832 bp Feature: gene Location: 3202056-3203345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3202311-3202980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320231 1 -3202980 bp Feature: domain Description: GIIM Note: maturase Location: 3203046-3203265 bp Feature: domain Description: GIIM Note: maturase Location: 3203046-3203265 bp Feature: gene Location: 3203472-3204158 bp Feature: gene Location: 3204241-3204528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lipase_3 (pfam01764), RVT-GII, HTH_MlrA-like_sg2 (cd04765), PhdYeFM_antitox (pfam02604), YoeB_toxin (pfam06769), DUF805 (pfam05656), Cys_rich_CPCC (pfam14206), GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)
DUF772 (pfam05598), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RimL (COG1670), cxxc_20_cxxc (TIGR04104)

Seq: JACJUV010000005.1 Teredinibacter franksiae strain Bsc2 2531935478, whole genome shotgun sequence (73387 bp)
Overview 1 RT 1: 69875-73141 bp Neighborhood of RT #1 [69875, 73386] RVT-UG4 Feature: gene Location: 69875-70006 bp Feature: gene Location: 70634-72046 bp Feature: gene Location: 72325-73386 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 72682-73141 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 72 682 -73141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: JACJUV010000008.1 Teredinibacter franksiae strain Bsc2 2531935482, whole genome shotgun sequence (658206 bp)
Overview 1 RT 1: 490181-493400 bp Neighborhood of RT #1 [490181, 493400] RVT-GII GIIM Feature: gene Location: 490181-490315 bp Feature: gene Location: 490334-490468 bp Feature: gene Location: 490622-491911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 490877-491546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 490877-491546 bp Feature: domain Description: GIIM Note: maturase Location: 491612-491831 bp Feature: domain Description: GIIM Note: maturase Location: 491612-49183 1 bp Feature: gene Location: 492526-492978 bp Feature: gene Location: 493107-493400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)