myRT

myRT report for GCA_014222135.1_ASM1422213v1

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Seq: JACKZO010000414.1 Trichormus variabilis ARAD plasmid pARAD-A NODE_347_length_2496_cov_10.5709, whole genome shotgun sequence (2496 bp)
Overview 1 RT 1: 128-1952 bp Neighborhood of RT #1 [128, 2011] RVT_N RVT-GII GIIM McrA Feature: gene Location: 128-2011 bp Feature: RT Description: RVT_N Location: 302-548 bp Feature: RT Description: RVT_N Location: 302-548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1 268 bp Feature: domain Description: GIIM Note: maturase Location: 1370-1601 bp Feature: domain Description: GIIM Note: maturase Location: 1 370-1 601 bp Feature: domain Description: McrA Location: 1685-1952 bp Feature: domain Description: McrA Location: 1 685-1 952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACKZO010000004.1 Trichormus variabilis ARAD NODE_4_length_74985_cov_6.83548, whole genome shotgun sequence (74985 bp)
Overview 1 RT 1: 34348-44215 bp Neighborhood of RT #1 [34348, 44215] AlbA_2 TPR TPR RVT-Retrons YprA YprA YprA Feature: gene Location: 34348-34539 bp Feature: gene Location: 34604-35668 bp Feature: domain Description: AlbA_2 Location: 34655-35084 bp Feature: domain Description: AlbA_2 Location: 34655-35084 bp Feature: domain Description: TPR Location: 35195-35465 bp Feature: domain Description: TPR Location: 35195-35465 bp Feature: domain Description: TPR Location: 35519-35600 bp Feature: domain Description: TPR Location: 35519-35600 bp Feature: gene Location: 36448-36993 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36451-36685 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36451-36685 bp Feature: gene Location: 37011-43292 bp Feature: domain Description: YprA Location: 37092-38103 bp Feature: domain Description: YprA Location: 37092 -38103 bp Feature: domain Description: YprA Location: 40194-40629 bp Feature: domain Description: YprA Location: 40194-4062 9 bp Feature: domain Description: YprA Location: 41967-42264 bp Feature: domain Description: YprA Location: 41967-42 2 64 bp Feature: gene Location: 43289-44215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlbA_2 (pfam04326), TPR (smart00028), RVT-Retrons, YprA (COG1205)