myRT

myRT report for GCA_014222245.1_ASM1422224v1

Download annotations/find similar RTs

Seq: JACKZQ010000571.1 Trichormus variabilis FSR plasmid pFSR-A NODE_416_length_2496_cov_24.3559, whole genome shotgun sequence (2496 bp)
Overview 1 RT 1: 128-1952 bp Neighborhood of RT #1 [128, 2011] RVT_N RVT-GII GIIM McrA Feature: gene Location: 128-2011 bp Feature: RT Description: RVT_N Location: 302-548 bp Feature: RT Description: RVT_N Location: 302-548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1 268 bp Feature: domain Description: GIIM Note: maturase Location: 1370-1601 bp Feature: domain Description: GIIM Note: maturase Location: 1 370-1 601 bp Feature: domain Description: McrA Location: 1685-1952 bp Feature: domain Description: McrA Location: 1 685-1 952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACKZQ010000020.1 Trichormus variabilis FSR NODE_35_length_40523_cov_11.1548, whole genome shotgun sequence (40523 bp)
Overview 1 RT 1: 2-8057 bp Neighborhood of RT #1 [2, 8057] RVT-Retrons YprA YprA YprA Feature: gene Location: 2-835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14-527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14-52 7 bp Feature: gene Location: 853-7134 bp Feature: domain Description: YprA Location: 934-1945 bp Feature: domain Description: YprA Location: 934-1945 bp Feature: domain Description: YprA Location: 4036-4471 bp Feature: domain Description: YprA Location: 4036-4471 bp Feature: domain Description: YprA Location: 5809-6106 bp Feature: domain Description: YprA Location: 5809-6106 bp Feature: gene Location: 7131-8057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JACKZQ010000392.1 Trichormus variabilis FSR NODE_446_length_1674_cov_8.27677, whole genome shotgun sequence (1674 bp)
Overview 1 RT 1: 1-1506 bp Neighborhood of RT #1 [1, 1574] RVT-Retrons AlbA_2 TPR TPR Feature: gene Location: 1-279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 184-271 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 184-271 bp Feature: gene Location: 510-1574 bp Feature: domain Description: AlbA_2 Location: 561-990 bp Feature: domain Description: AlbA_2 Location: 561-990 bp Feature: domain Description: TPR Location: 1101-1371 bp Feature: domain Description: TPR Location: 1101-13 71 bp Feature: domain Description: TPR Location: 1425-1506 bp Feature: domain Description: TPR Location: 1425-1506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AlbA_2 (pfam04326), TPR (smart00028)