myRT

myRT report for GCA_014223335.1_ASM1422333v1

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Seq: JAARQE010000011.1 Listeria fleischmannii strain FSL L7-1629 NODE_11_length_94064_cov_36.345952, whole genome shotgun sequence (94064 bp)
Overview 1 RT 1: 44917-48891 bp Neighborhood of RT #1 [44917, 48956] PdaC DUF3298 Sig70_famx3 RVT-Retrons ThrE ThrE_2 Feature: gene Location: 44917-45762 bp Feature: domain Description: PdaC Location: 45169-45388 bp Feature: domain Description: PdaC Location: 451 69-45388 bp Feature: domain Description: DUF3298 Location: 45475-45718 bp Feature: domain Description: DUF3298 Location: 45475-4571 8 bp Feature: gene Location: 45767-46270 bp Feature: domain Description: Sig70_famx3 Location: 45788-46238 bp Feature: domain Description: Sig70_famx3 Location: 45788-46238 bp Feature: gene Location: 46622-47605 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46787-47342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46787-47342 bp Feature: gene Location: 47665-48474 bp Feature: domain Description: ThrE Location: 47755-48466 bp Feature: domain Description: ThrE Location: 47755-48466 bp Feature: gene Location: 48489-48956 bp Feature: domain Description: ThrE_2 Location: 48516-48891 bp Feature: domain Description: ThrE_2 Location: 4851 6-48891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PdaC, DUF3298 (pfam11738), Sig70_famx3 (TIGR02954), RVT-Retrons, ThrE (pfam06738), ThrE_2 (pfam12821)

Seq: JAARQE010000022.1 Listeria fleischmannii strain FSL L7-1629 NODE_22_length_32728_cov_25.749196, whole genome shotgun sequence (32728 bp)
Overview 1 RT 1: 16950-21372 bp Neighborhood of RT #1 [16950, 21372] HTH_Tnp_1 RVT-Retrons AbiJ_NTD3 Feature: gene Location: 16950-17267 bp Feature: domain Description: HTH_Tnp_1 Location: 17010-17217 bp Feature: domain Description: HTH_Tnp_1 Location: 17010-172 17 bp Feature: gene Location: 17470-17736 bp Feature: gene Location: 18062-19693 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18191-18770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18191-18770 bp Feature: gene Location: 20066-20950 bp Feature: domain Description: AbiJ_NTD3 Location: 20081-20552 bp Feature: domain Description: AbiJ_NTD3 Location: 2 0081-2 0552 bp Feature: gene Location: 21019-21372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, AbiJ_NTD3 (pfam18860)