myRT

myRT report for GCA_014223345.1_ASM1422334v1

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Seq: JAARQF010000003.1 Listeria seeligeri strain FSL L7-1626 NODE_3_length_227105_cov_24.784027, whole genome shotgun sequence (227105 bp)
Overview 1 RT 1: 75556-82153 bp Neighborhood of RT #1 [75556, 82153] COG4835 COG5341 RVT-AbiP2 PRK06241 Feature: gene Location: 75556-75948 bp Feature: domain Description: COG4835 Location: 75559-75928 bp Feature: domain Description: COG4835 Location: 75559-75928 bp Feature: gene Location: 75961-76383 bp Feature: domain Description: COG5341 Location: 75964-76372 bp Feature: domain Description: COG5341 Location: 75964-76372 bp Feature: gene Location: 76599-78392 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 77073-77541 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 77073-77541 bp Feature: gene Location: 78482-81079 bp Feature: domain Description: PRK06241 Location: 78485-81077 bp Feature: domain Description: PRK06241 Location: 78485-81 077 bp Feature: gene Location: 81281-82153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4835 (Uncharacterized protein ), COG5341 (Uncharacterized protein ), RVT-AbiP2, PRK06241 (phosphoenolpyruvate synthase; Validated)

Seq: JAARQF010000004.1 Listeria seeligeri strain FSL L7-1626 NODE_4_length_226396_cov_19.294399, whole genome shotgun sequence (226396 bp)
Overview 1 RT 1: 897-3468 bp Neighborhood of RT #1 [897, 3488] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 897-1235 bp Feature: domain Description: Trypsin_2 Location: 903-1173 bp Feature: domain Description: Trypsin_2 Location: 903-1173 bp Feature: gene Location: 1370-1684 bp Feature: gene Location: 1780-2076 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1783-2059 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1783-2 059 bp Feature: gene Location: 2089-2442 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2275-2440 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 75-2 440 bp Feature: gene Location: 2458-2589 bp Feature: gene Location: 2928-3488 bp Feature: domain Description: YgdH Location: 2931-3468 bp Feature: domain Description: YgdH Location: 2 931-3468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)