myRT

myRT report for GCA_014224045.1_ASM1422404v1

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Seq: JAARRP010000021.1 Listeria seeligeri strain FSL L7-1467 NODE_21_length_19573_cov_57.437372, whole genome shotgun sequence (19573 bp)
Overview 1 RT 1: 147-2963 bp Neighborhood of RT #1 [147, 2983] RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 147-1940 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621-1089 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621 -1 089 bp Feature: gene Location: 2156-2578 bp Feature: domain Description: COG5341 Location: 2159-2567 bp Feature: domain Description: COG5341 Location: 21 59-2567 bp Feature: gene Location: 2591-2983 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )

Seq: JAARRP010000004.1 Listeria seeligeri strain FSL L7-1467 NODE_4_length_225845_cov_34.194793, whole genome shotgun sequence (225845 bp)
Overview 1 RT 1: 222049-224728 bp Neighborhood of RT #1 [222049, 224826] YgdH RVT-Retrons RVT-Retrons Trypsin_2 Feature: gene Location: 222049-222609 bp Feature: domain Description: YgdH Location: 222052-222589 bp Feature: domain Description: YgdH Location: 2 2 2 052 -2 2 2 589 bp Feature: gene Location: 222948-223079 bp Feature: gene Location: 223095-223448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223281-223446 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 32 81-2 2 3446 bp Feature: gene Location: 223461-223757 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223464-223740 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 3464-2 2 3740 bp Feature: gene Location: 223853-224167 bp Feature: gene Location: 224302-224826 bp Feature: domain Description: Trypsin_2 Location: 224308-224728 bp Feature: domain Description: Trypsin_2 Location: 2 2 4308-2 2 472 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgdH (COG1611), RVT-Retrons, Trypsin_2 (pfam13365)