myRT

myRT report for GCA_014224075.1_ASM1422407v1

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Seq: JAARRQ010000002.1 Listeria seeligeri strain FSL L7-1465 NODE_2_length_424177_cov_36.170446, whole genome shotgun sequence (424177 bp)
Overview 1 RT 1: 112706-115277 bp Neighborhood of RT #1 [112706, 115297] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 112706-113044 bp Feature: domain Description: Trypsin_2 Location: 112712-112982 bp Feature: domain Description: Trypsin_2 Location: 1 1 271 2-1 1 2982 bp Feature: gene Location: 113179-113493 bp Feature: gene Location: 113589-113885 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113592-113868 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 3592-1 1 3868 bp Feature: gene Location: 113898-114251 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 114084-114249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 4084-1 1 4249 bp Feature: gene Location: 114267-114398 bp Feature: gene Location: 114737-115297 bp Feature: domain Description: YgdH Location: 114740-115277 bp Feature: domain Description: YgdH Location: 1 1 4740-1 1 5277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)

Seq: JAARRQ010000003.1 Listeria seeligeri strain FSL L7-1465 NODE_3_length_283500_cov_48.527974, whole genome shotgun sequence (283500 bp)
Overview 1 RT 1: 144816-151413 bp Neighborhood of RT #1 [144816, 151413] COG4835 COG5341 RVT-AbiP2 PRK06241 Feature: gene Location: 144816-145208 bp Feature: domain Description: COG4835 Location: 144819-145188 bp Feature: domain Description: COG4835 Location: 144819-145188 bp Feature: gene Location: 145221-145643 bp Feature: domain Description: COG5341 Location: 145224-145632 bp Feature: domain Description: COG5341 Location: 1452 2 4-145632 bp Feature: gene Location: 145859-147652 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 146333-146801 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 146333-146801 bp Feature: gene Location: 147742-150339 bp Feature: domain Description: PRK06241 Location: 147745-150337 bp Feature: domain Description: PRK062 41 Location: 147745-150337 bp Feature: gene Location: 150541-151413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4835 (Uncharacterized protein ), COG5341 (Uncharacterized protein ), RVT-AbiP2, PRK06241 (phosphoenolpyruvate synthase; Validated)