myRT

myRT report for GCA_014224415.1_ASM1422441v1

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Seq: JAARRY010000001.1 Listeria seeligeri strain FSL L7-1363 NODE_1_length_442813_cov_48.649468, whole genome shotgun sequence (442813 bp)
Overview 1 RT 1: 131343-133914 bp Neighborhood of RT #1 [131343, 133934] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 131343-131681 bp Feature: domain Description: Trypsin_2 Location: 131349-131619 bp Feature: domain Description: Trypsin_2 Location: 1 31 349-1 31 61 9 bp Feature: gene Location: 131816-132130 bp Feature: gene Location: 132226-132522 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132229-132505 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 32229-1 32505 bp Feature: gene Location: 132535-132888 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132721-132886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 32721 -1 32886 bp Feature: gene Location: 132904-133035 bp Feature: gene Location: 133374-133934 bp Feature: domain Description: YgdH Location: 133377-133914 bp Feature: domain Description: YgdH Location: 1 33377-1 3391 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)

Seq: JAARRY010000003.1 Listeria seeligeri strain FSL L7-1363 NODE_3_length_310284_cov_66.449497, whole genome shotgun sequence (310284 bp)
Overview 1 RT 1: 151141-157718 bp Neighborhood of RT #1 [151141, 157738] PRK06241 RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 151141-152013 bp Feature: gene Location: 152215-154812 bp Feature: domain Description: PRK06241 Location: 152218-154810 bp Feature: domain Description: PRK062 41 Location: 152 2 18-154810 bp Feature: gene Location: 154902-156695 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 155376-155844 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 155376-155844 bp Feature: gene Location: 156911-157333 bp Feature: domain Description: COG5341 Location: 156914-157322 bp Feature: domain Description: COG5341 Location: 156914-15732 2 bp Feature: gene Location: 157346-157738 bp Feature: domain Description: COG4835 Location: 157349-157718 bp Feature: domain Description: COG4835 Location: 157349-157718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06241 (phosphoenolpyruvate synthase; Validated), RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )