myRT

myRT report for GCA_014224555.1_ASM1422455v1

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Seq: JAASUO010000013.1 Listeria rocourtiae strain FSL L7-1319 NODE_13_length_79372_cov_97.483700, whole genome shotgun sequence (79372 bp)
Overview 1 RT 1: 29622-35889 bp Neighborhood of RT #1 [29622, 35900] Big_6 Big_6 Big_6 Big_6 Big_6 LamGL LamGL LamGL Crp RVT-GII GIIM LytT Feature: gene Location: 29622-32885 bp Feature: domain Description: Big_6 Location: 30306-30543 bp Feature: domain Description: Big_6 Location: 30306-30543 bp Feature: domain Description: Big_6 Location: 30564-30804 bp Feature: domain Description: Big_6 Location: 30564-30804 bp Feature: domain Description: Big_6 Location: 30816-31047 bp Feature: domain Description: Big_6 Location: 3081 6-31 047 bp Feature: domain Description: Big_6 Location: 31071-31311 bp Feature: domain Description: Big_6 Location: 31 071 -31 31 1 bp Feature: domain Description: Big_6 Location: 31320-31557 bp Feature: domain Description: Big_6 Location: 31 320-31 557 bp Feature: domain Description: LamGL Location: 31611-31695 bp Feature: domain Description: LamGL Location: 31 61 1 -31 695 bp Feature: domain Description: LamGL Location: 31812-31983 bp Feature: domain Description: LamGL Location: 31 81 2-31 983 bp Feature: domain Description: LamGL Location: 32661-32793 bp Feature: domain Description: LamGL Location: 32661 -32793 bp Feature: gene Location: 32986-33636 bp Feature: domain Description: Crp Location: 33298-33613 bp Feature: domain Description: Crp Location: 33298-3361 3 bp Feature: gene Location: 34094-34762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34097-34310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34097-3431 0 bp Feature: domain Description: GIIM Note: maturase Location: 34373-34592 bp Feature: domain Description: GIIM Note: maturase Location: 34373-34592 bp Feature: gene Location: 35023-35157 bp Feature: gene Location: 35154-35900 bp Feature: domain Description: LytT Location: 35157-35889 bp Feature: domain Description: LytT Location: 351 57-35889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_6 (pfam17936), LamGL (smart00560), Crp (pfam00325), RVT-GII, GIIM (pfam08388), LytT (COG3279)

Seq: JAASUO010000004.1 Listeria rocourtiae strain FSL L7-1319 NODE_4_length_137688_cov_75.543932, whole genome shotgun sequence (137688 bp)
Overview 1 RT 1: 53133-56500 bp Neighborhood of RT #1 [53133, 56500] PRK10220 RVT-UG17 SLATT_5 Feature: gene Location: 53133-53471 bp Feature: domain Description: PRK10220 Location: 53142-53466 bp Feature: domain Description: PRK102 2 0 Location: 53142 -53466 bp Feature: gene Location: 53456-53776 bp Feature: gene Location: 54012-55382 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 54240-54816 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 542 40-54816 bp Feature: gene Location: 55382-56125 bp Feature: domain Description: SLATT_5 Location: 55571-56114 bp Feature: domain Description: SLATT_5 Location: 55571-56114 bp Feature: gene Location: 56288-56500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10220 (phnA family protein), RVT-UG17, SLATT_5 (pfam18160)