myRT

myRT report for GCA_014225645.1_ASM1422564v1

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Seq: JAARUN010000015.1 Listeria seeligeri strain FSL L7-1054 NODE_15_length_71218_cov_46.575927, whole genome shotgun sequence (71218 bp)
Overview 1 RT 1: 147-2963 bp Neighborhood of RT #1 [147, 2983] RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 147-1940 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621-1089 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621 -1 089 bp Feature: gene Location: 2156-2578 bp Feature: domain Description: COG5341 Location: 2159-2567 bp Feature: domain Description: COG5341 Location: 21 59-2567 bp Feature: gene Location: 2591-2983 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )

Seq: JAARUN010000003.1 Listeria seeligeri strain FSL L7-1054 NODE_3_length_295563_cov_34.911651, whole genome shotgun sequence (295563 bp)
Overview 1 RT 1: 70740-73497 bp Neighborhood of RT #1 [70740, 73517] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 70740-71264 bp Feature: domain Description: Trypsin_2 Location: 70746-71166 bp Feature: domain Description: Trypsin_2 Location: 70746-71166 bp Feature: gene Location: 71399-71713 bp Feature: gene Location: 71809-72105 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71812-72088 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71812 -72 088 bp Feature: gene Location: 72118-72471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72304-72469 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 304-72 469 bp Feature: gene Location: 72487-72618 bp Feature: gene Location: 72957-73517 bp Feature: domain Description: YgdH Location: 72960-73497 bp Feature: domain Description: YgdH Location: 72 960-73497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)