myRT

myRT report for GCA_014225815.1_ASM1422581v1

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Seq: JAASUU010000001.1 Listeria seeligeri strain FSL L7-1037 NODE_1_length_395375_cov_93.032535, whole genome shotgun sequence (395375 bp)
Overview 1 RT 1: 83906-86477 bp Neighborhood of RT #1 [83906, 86497] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 83906-84244 bp Feature: domain Description: Trypsin_2 Location: 83912-84182 bp Feature: domain Description: Trypsin_2 Location: 8391 2-841 82 bp Feature: gene Location: 84379-84693 bp Feature: gene Location: 84789-85085 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84792-85068 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84792-85068 bp Feature: gene Location: 85098-85451 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85284-85449 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85284-85449 bp Feature: gene Location: 85467-85598 bp Feature: gene Location: 85937-86497 bp Feature: domain Description: YgdH Location: 85940-86477 bp Feature: domain Description: YgdH Location: 85940-86477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)

Seq: JAASUU010000003.1 Listeria seeligeri strain FSL L7-1037 NODE_3_length_297339_cov_130.342042, whole genome shotgun sequence (297339 bp)
Overview 1 RT 1: 144818-151415 bp Neighborhood of RT #1 [144818, 151415] COG4835 COG5341 RVT-AbiP2 PRK06241 Feature: gene Location: 144818-145210 bp Feature: domain Description: COG4835 Location: 144821-145190 bp Feature: domain Description: COG4835 Location: 14482 1-145190 bp Feature: gene Location: 145223-145645 bp Feature: domain Description: COG5341 Location: 145226-145634 bp Feature: domain Description: COG5341 Location: 1452 2 6-145634 bp Feature: gene Location: 145861-147654 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 146335-146803 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 146335-146803 bp Feature: gene Location: 147744-150341 bp Feature: domain Description: PRK06241 Location: 147747-150339 bp Feature: domain Description: PRK062 41 Location: 147747-150339 bp Feature: gene Location: 150543-151415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4835 (Uncharacterized protein ), COG5341 (Uncharacterized protein ), RVT-AbiP2, PRK06241 (phosphoenolpyruvate synthase; Validated)