myRT

myRT report for GCA_014226175.1_ASM1422617v1

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Seq: JAARVK010000021.1 Listeria seeligeri strain FSL L7-0949 NODE_21_length_19573_cov_53.396543, whole genome shotgun sequence (19573 bp)
Overview 1 RT 1: 147-2963 bp Neighborhood of RT #1 [147, 2983] RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 147-1940 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621-1089 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621 -1 089 bp Feature: gene Location: 2156-2578 bp Feature: domain Description: COG5341 Location: 2159-2567 bp Feature: domain Description: COG5341 Location: 21 59-2567 bp Feature: gene Location: 2591-2983 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )

Seq: JAARVK010000002.1 Listeria seeligeri strain FSL L7-0949 NODE_2_length_295565_cov_31.552919, whole genome shotgun sequence (295565 bp)
Overview 1 RT 1: 70741-73498 bp Neighborhood of RT #1 [70741, 73518] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 70741-71265 bp Feature: domain Description: Trypsin_2 Location: 70747-71167 bp Feature: domain Description: Trypsin_2 Location: 70747-71167 bp Feature: gene Location: 71400-71714 bp Feature: gene Location: 71810-72106 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71813-72089 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71813-72 089 bp Feature: gene Location: 72119-72472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72305-72470 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 305-72 470 bp Feature: gene Location: 72488-72619 bp Feature: gene Location: 72958-73518 bp Feature: domain Description: YgdH Location: 72961-73498 bp Feature: domain Description: YgdH Location: 72 961-73498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)