myRT

myRT report for GCA_014226285.1_ASM1422628v1

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Seq: JAASUY010000021.1 Listeria seeligeri strain FSL L7-0937 NODE_21_length_19573_cov_159.787238, whole genome shotgun sequence (19573 bp)
Overview 1 RT 1: 147-2963 bp Neighborhood of RT #1 [147, 2983] RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 147-1940 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621-1089 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621 -1 089 bp Feature: gene Location: 2156-2578 bp Feature: domain Description: COG5341 Location: 2159-2567 bp Feature: domain Description: COG5341 Location: 21 59-2567 bp Feature: gene Location: 2591-2983 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )

Seq: JAASUY010000003.1 Listeria seeligeri strain FSL L7-0937 NODE_3_length_293555_cov_106.341736, whole genome shotgun sequence (293555 bp)
Overview 1 RT 1: 68250-71007 bp Neighborhood of RT #1 [68250, 71027] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 68250-68774 bp Feature: domain Description: Trypsin_2 Location: 68256-68676 bp Feature: domain Description: Trypsin_2 Location: 682 56-68676 bp Feature: gene Location: 68909-69223 bp Feature: gene Location: 69319-69615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69322-69598 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6932 2 -69598 bp Feature: gene Location: 69628-69981 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69814-69979 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69814-69979 bp Feature: gene Location: 69997-70128 bp Feature: gene Location: 70467-71027 bp Feature: domain Description: YgdH Location: 70470-71007 bp Feature: domain Description: YgdH Location: 70470-71007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)