myRT

myRT report for GCA_014226435.1_ASM1422643v1

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Seq: JAARVV010000002.1 Listeria seeligeri strain FSL L7-0904 NODE_2_length_309821_cov_29.962372, whole genome shotgun sequence (309821 bp)
Overview 1 RT 1: 83905-86476 bp Neighborhood of RT #1 [83905, 86496] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 83905-84243 bp Feature: domain Description: Trypsin_2 Location: 83911-84181 bp Feature: domain Description: Trypsin_2 Location: 8391 1 -841 81 bp Feature: gene Location: 84378-84692 bp Feature: gene Location: 84788-85084 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84791-85067 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84791 -85067 bp Feature: gene Location: 85097-85450 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85283-85448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85283-85448 bp Feature: gene Location: 85466-85597 bp Feature: gene Location: 85936-86496 bp Feature: domain Description: YgdH Location: 85939-86476 bp Feature: domain Description: YgdH Location: 85939-86476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)

Seq: JAARVV010000003.1 Listeria seeligeri strain FSL L7-0904 NODE_3_length_283510_cov_38.823200, whole genome shotgun sequence (283510 bp)
Overview 1 RT 1: 132093-138670 bp Neighborhood of RT #1 [132093, 138690] PRK06241 RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 132093-132965 bp Feature: gene Location: 133167-135764 bp Feature: domain Description: PRK06241 Location: 133170-135762 bp Feature: domain Description: PRK062 41 Location: 133170-135762 bp Feature: gene Location: 135854-137647 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 136328-136796 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 13632 8-136796 bp Feature: gene Location: 137863-138285 bp Feature: domain Description: COG5341 Location: 137866-138274 bp Feature: domain Description: COG5341 Location: 137866-1382 74 bp Feature: gene Location: 138298-138690 bp Feature: domain Description: COG4835 Location: 138301-138670 bp Feature: domain Description: COG4835 Location: 138301-138670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06241 (phosphoenolpyruvate synthase; Validated), RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )