myRT

myRT report for GCA_014226555.1_ASM1422655v1

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Seq: JAARVY010000021.1 Listeria seeligeri strain FSL L7-0896 NODE_21_length_19573_cov_38.914752, whole genome shotgun sequence (19573 bp)
Overview 1 RT 1: 147-2963 bp Neighborhood of RT #1 [147, 2983] RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 147-1940 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621-1089 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621 -1 089 bp Feature: gene Location: 2156-2578 bp Feature: domain Description: COG5341 Location: 2159-2567 bp Feature: domain Description: COG5341 Location: 21 59-2567 bp Feature: gene Location: 2591-2983 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Feature: domain Description: COG4835 Location: 2594-2963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )

Seq: JAARVY010000003.1 Listeria seeligeri strain FSL L7-0896 NODE_3_length_293713_cov_22.336147, whole genome shotgun sequence (293713 bp)
Overview 1 RT 1: 222048-224727 bp Neighborhood of RT #1 [222048, 224825] YgdH RVT-Retrons RVT-Retrons Trypsin_2 Feature: gene Location: 222048-222608 bp Feature: domain Description: YgdH Location: 222051-222588 bp Feature: domain Description: YgdH Location: 2 2 2 051-2 2 2 588 bp Feature: gene Location: 222947-223078 bp Feature: gene Location: 223094-223447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223280-223445 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 32 80-2 2 3445 bp Feature: gene Location: 223460-223756 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223463-223739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 3463-2 2 3739 bp Feature: gene Location: 223852-224166 bp Feature: gene Location: 224301-224825 bp Feature: domain Description: Trypsin_2 Location: 224307-224727 bp Feature: domain Description: Trypsin_2 Location: 2 2 4307-2 2 472 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgdH (COG1611), RVT-Retrons, Trypsin_2 (pfam13365)