myRT

myRT report for GCA_014226605.1_ASM1422660v1

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Seq: JAASVA010000010.1 Listeria seeligeri strain FSL L7-0836 NODE_10_length_114561_cov_121.446910, whole genome shotgun sequence (114561 bp)
Overview 1 RT 1: 102358-105844 bp Neighborhood of RT #1 [102358, 105852] DUF4918 YgdH RVT-Retrons RVT-Retrons DUF4467 Feature: gene Location: 102358-103065 bp Feature: domain Description: DUF4918 Location: 102376-103054 bp Feature: domain Description: DUF491 8 Location: 1 02376-1 03054 bp Feature: gene Location: 103085-103645 bp Feature: domain Description: YgdH Location: 103088-103625 bp Feature: domain Description: YgdH Location: 1 03088-1 03625 bp Feature: gene Location: 104131-104484 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104317-104479 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0431 7-1 04479 bp Feature: gene Location: 104497-104793 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104500-104776 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 04500-1 04776 bp Feature: gene Location: 105338-105577 bp Feature: gene Location: 105604-105852 bp Feature: domain Description: DUF4467 Location: 105640-105844 bp Feature: domain Description: DUF4467 Location: 1 05640-1 05844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4918 (pfam16265), YgdH (COG1611), RVT-Retrons, DUF4467 (pfam14729)

Seq: JAASVA010000003.1 Listeria seeligeri strain FSL L7-0836 NODE_3_length_291068_cov_165.531707, whole genome shotgun sequence (291068 bp)
Overview 1 RT 1: 129453-136030 bp Neighborhood of RT #1 [129453, 136050] PRK06241 RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 129453-130325 bp Feature: gene Location: 130527-133124 bp Feature: domain Description: PRK06241 Location: 130530-133122 bp Feature: domain Description: PRK062 41 Location: 130530-13312 2 bp Feature: gene Location: 133214-135007 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 133688-134156 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 133688-134156 bp Feature: gene Location: 135223-135645 bp Feature: domain Description: COG5341 Location: 135226-135634 bp Feature: domain Description: COG5341 Location: 1352 2 6-135634 bp Feature: gene Location: 135658-136050 bp Feature: domain Description: COG4835 Location: 135661-136030 bp Feature: domain Description: COG4835 Location: 135661-136030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06241 (phosphoenolpyruvate synthase; Validated), RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )