myRT

myRT report for GCA_014226615.1_ASM1422661v1

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Seq: JAARWD010000012.1 Listeria seeligeri strain FSL L7-0842 NODE_12_length_130736_cov_42.335576, whole genome shotgun sequence (130736 bp)
Overview 1 RT 1: 772-3343 bp Neighborhood of RT #1 [772, 3363] Trypsin_2 RVT-Retrons RVT-Retrons YgdH Feature: gene Location: 772-1110 bp Feature: domain Description: Trypsin_2 Location: 778-1048 bp Feature: domain Description: Trypsin_2 Location: 778-1 048 bp Feature: gene Location: 1245-1559 bp Feature: gene Location: 1655-1951 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1658-1934 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 658-1 934 bp Feature: gene Location: 1964-2317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2150-2315 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 50-231 5 bp Feature: gene Location: 2333-2464 bp Feature: gene Location: 2803-3363 bp Feature: domain Description: YgdH Location: 2806-3343 bp Feature: domain Description: YgdH Location: 2806-3343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, YgdH (COG1611)

Seq: JAARWD010000008.1 Listeria seeligeri strain FSL L7-0842 NODE_8_length_159684_cov_61.906395, whole genome shotgun sequence (159684 bp)
Overview 1 RT 1: 8268-14845 bp Neighborhood of RT #1 [8268, 14865] PRK06241 RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 8268-9140 bp Feature: gene Location: 9342-11939 bp Feature: domain Description: PRK06241 Location: 9345-11937 bp Feature: domain Description: PRK062 41 Location: 9345-11937 bp Feature: gene Location: 12029-13822 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12503-12971 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12 503-12 971 bp Feature: gene Location: 14038-14460 bp Feature: domain Description: COG5341 Location: 14041-14449 bp Feature: domain Description: COG5341 Location: 14041-14449 bp Feature: gene Location: 14473-14865 bp Feature: domain Description: COG4835 Location: 14476-14845 bp Feature: domain Description: COG4835 Location: 14476-14845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06241 (phosphoenolpyruvate synthase; Validated), RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )