myRT

myRT report for GCA_014227535.1_ASM1422753v1

Download annotations/find similar RTs

Seq: JAARWS010000025.1 Listeria booriae strain FSL L7-0519 NODE_25_length_840_cov_166.262272, whole genome shotgun sequence (840 bp)
Overview 1 RT 1: 501-840 bp Neighborhood of RT #1 [501, 839] RVT-GII Feature: gene Location: 501-839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 711-840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 1 -840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAARWS010000026.1 Listeria booriae strain FSL L7-0519 NODE_26_length_746_cov_129.639742, whole genome shotgun sequence (746 bp)
Overview 1 RT 1: 82-574 bp Neighborhood of RT #1 [82, 744] RVT-GII GIIM Feature: gene Location: 82-744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85-292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85-2 92 bp Feature: domain Description: GIIM Note: maturase Location: 355-574 bp Feature: domain Description: GIIM Note: maturase Location: 355-574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAARWS010000029.1 Listeria booriae strain FSL L7-0519 NODE_29_length_533_cov_194.884236, whole genome shotgun sequence (533 bp)
Overview 1 RT 1: 1-532 bp Neighborhood of RT #1 [1, 531] RVT-GII Feature: gene Location: 1-531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-53 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAARWS010000006.1 Listeria booriae strain FSL L7-0519 NODE_6_length_262525_cov_40.722201, whole genome shotgun sequence (262525 bp)
Overview 1 RT 1: 160045-165301 bp Neighborhood of RT #1 [160045, 165303] RVT-Retrons AAA_15 AAA_15 TOPRIM_OLD COG5620 Feature: gene Location: 160045-160872 bp Feature: gene Location: 161016-161177 bp Feature: gene Location: 161487-162530 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 161607-162165 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 161607-162165 bp Feature: gene Location: 162756-164717 bp Feature: domain Description: AAA_15 Location: 162759-163083 bp Feature: domain Description: AAA_15 Location: 162759-163083 bp Feature: domain Description: AAA_15 Location: 163293-163665 bp Feature: domain Description: AAA_15 Location: 163293-163665 bp Feature: domain Description: TOPRIM_OLD Location: 163800-164028 bp Feature: domain Description: TOPRIM_OLD Location: 163800-164 028 bp Feature: gene Location: 164755-165303 bp Feature: domain Description: COG5620 Location: 164779-165301 bp Feature: domain Description: COG5620 Location: 164 779-165301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175), TOPRIM_OLD (cd01026), COG5620 (Uncharacterized protein )