myRT

myRT report for GCA_014227595.1_ASM1422759v1

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Seq: JAARWU010000021.1 Listeria booriae strain FSL L7-0509 NODE_21_length_1392_cov_679.782510, whole genome shotgun sequence (1392 bp)
Overview 1 RT 1: 1-1200 bp Neighborhood of RT #1 [1, 1200] RVT-GII Feature: gene Location: 1-825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42-763 bp Feature: gene Location: 868-1200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAARWU010000006.1 Listeria booriae strain FSL L7-0509 NODE_6_length_248787_cov_66.475662, whole genome shotgun sequence (248787 bp)
Overview 1 RT 1: 14676-22164 bp Neighborhood of RT #1 [14676, 22193] UvrA UvrA UvrA uvrC RVT-UG17 SLATT_5 sufB Feature: gene Location: 14676-16916 bp Feature: domain Description: UvrA Location: 14682-15042 bp Feature: domain Description: UvrA Location: 14682 -15042 bp Feature: domain Description: UvrA Location: 15054-16176 bp Feature: domain Description: UvrA Location: 15054-16176 bp Feature: domain Description: UvrA Location: 16188-16914 bp Feature: domain Description: UvrA Location: 16188-16914 bp Feature: gene Location: 17022-18128 bp Feature: domain Description: uvrC Location: 17052-18096 bp Feature: domain Description: uvrC Location: 17052 -18096 bp Feature: gene Location: 18375-19739 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 18603-19179 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 18603-19179 bp Feature: gene Location: 19736-20341 bp Feature: domain Description: SLATT_5 Location: 19775-20327 bp Feature: domain Description: SLATT_5 Location: 19775-2 032 7 bp Feature: gene Location: 20799-22193 bp Feature: domain Description: sufB Location: 20826-22164 bp Feature: domain Description: sufB Location: 2 082 6-2 2 164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), uvrC (TIGR00194), RVT-UG17, SLATT_5 (pfam18160), sufB (TIGR01980)