myRT

myRT report for GCA_014228005.1_ASM1422800v1

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Seq: JAARXD010000012.1 Listeria booriae strain FSL L7-0370 NODE_12_length_93666_cov_34.520307, whole genome shotgun sequence (93666 bp)
Overview 1 RT 1: 618-3438 bp Neighborhood of RT #1 [618, 3455] RVT-Retrons PinE Feature: gene Location: 618-2336 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 753-1353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 753-1 353 bp Feature: gene Location: 2543-2698 bp Feature: gene Location: 2748-3455 bp Feature: domain Description: PinE Location: 2817-3438 bp Feature: domain Description: PinE Location: 281 7-3438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-Retrons

Seq: JAARXD010000003.1 Listeria booriae strain FSL L7-0370 NODE_3_length_292954_cov_52.460798, whole genome shotgun sequence (292954 bp)
Overview 1 RT 1: 290447-292781 bp Neighborhood of RT #1 [290447, 292951] Cah RVT-GII GIIM Feature: gene Location: 290447-291199 bp Feature: gene Location: 291253-292026 bp Feature: domain Description: Cah Location: 291427-292015 bp Feature: domain Description: Cah Location: 2 9142 7-2 92 015 bp Feature: gene Location: 292340-292951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292343-292499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 343-2 92 499 bp Feature: domain Description: GIIM Note: maturase Location: 292562-292781 bp Feature: domain Description: GIIM Note: maturase Location: 2 92 562 -2 92 781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cah (COG3338), RVT-GII, GIIM (pfam08388)

Seq: JAARXD010000007.1 Listeria booriae strain FSL L7-0370 NODE_7_length_250574_cov_74.118884, whole genome shotgun sequence (250574 bp)
Overview 1 RT 1: 197318-202359 bp Neighborhood of RT #1 [197318, 202823] Peptidase_S66_mccF_like Peptidase_S66_mccF_like RVT-GII GIIM DUF2177 YloV Feature: gene Location: 197318-198229 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 197372-197756 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 1973 72-197756 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 197819-198185 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 197819-198185 bp Feature: gene Location: 198208-198501 bp Feature: gene Location: 199176-200459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199386-200007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1993 86-200007 bp Feature: domain Description: GIIM Note: maturase Location: 200070-200289 bp Feature: domain Description: GIIM Note: maturase Location: 200070-200289 bp Feature: gene Location: 200632-201033 bp Feature: domain Description: DUF2177 Location: 200659-201007 bp Feature: domain Description: DUF2177 Location: 200659-201007 bp Feature: gene Location: 201054-202823 bp Feature: domain Description: YloV Location: 201069-202359 bp Feature: domain Description: YloV Location: 201069-2023 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S66_mccF_like (cd07062), RVT-GII, GIIM (pfam08388), DUF2177 (pfam09945), YloV (TIGR03599)