myRT

myRT report for GCA_014228845.1_ASM1422884v1

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Seq: JAARYR010000001.1 Listeria seeligeri strain FSL L7-0191 NODE_1_length_453130_cov_59.807713, whole genome shotgun sequence (453130 bp)
Overview 1 RT 1: 337841-340370 bp Neighborhood of RT #1 [337841, 340432] YgdH RVT-Retrons RVT-Retrons Trypsin_2 Feature: gene Location: 337841-338401 bp Feature: domain Description: YgdH Location: 337844-338381 bp Feature: domain Description: YgdH Location: 337844-338381 bp Feature: gene Location: 338740-338871 bp Feature: gene Location: 338887-339240 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339073-339238 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339073-339238 bp Feature: gene Location: 339253-339549 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339256-339532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339256-339532 bp Feature: gene Location: 339645-339959 bp Feature: gene Location: 340094-340432 bp Feature: domain Description: Trypsin_2 Location: 340100-340370 bp Feature: domain Description: Trypsin_2 Location: 3401 00-340370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgdH (COG1611), RVT-Retrons, Trypsin_2 (pfam13365)

Seq: JAARYR010000003.1 Listeria seeligeri strain FSL L7-0191 NODE_3_length_327269_cov_80.430915, whole genome shotgun sequence (327269 bp)
Overview 1 RT 1: 171605-178182 bp Neighborhood of RT #1 [171605, 178202] PRK06241 RVT-AbiP2 COG5341 COG4835 Feature: gene Location: 171605-172477 bp Feature: gene Location: 172679-175276 bp Feature: domain Description: PRK06241 Location: 172682-175274 bp Feature: domain Description: PRK062 41 Location: 172 682 -1752 74 bp Feature: gene Location: 175366-177159 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 175840-176308 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 175840-176308 bp Feature: gene Location: 177375-177797 bp Feature: domain Description: COG5341 Location: 177378-177786 bp Feature: domain Description: COG5341 Location: 177378-177786 bp Feature: gene Location: 177810-178202 bp Feature: domain Description: COG4835 Location: 177813-178182 bp Feature: domain Description: COG4835 Location: 177813-178182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06241 (phosphoenolpyruvate synthase; Validated), RVT-AbiP2, COG5341 (Uncharacterized protein ), COG4835 (Uncharacterized protein )