myRT

myRT report for GCA_014229385.1_ASM1422938v1

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Seq: JAARZT010000027.1 Listeria booriae strain FSL L7-0051 NODE_27_length_45255_cov_38.662981, whole genome shotgun sequence (45255 bp)
Overview 1 RT 1: 42074-45250 bp Neighborhood of RT #1 [42074, 45252] PurR Cof RVT-GII Feature: gene Location: 42074-43135 bp Feature: domain Description: PurR Location: 42092-43127 bp Feature: domain Description: PurR Location: 42092-431 27 bp Feature: gene Location: 43147-43959 bp Feature: domain Description: Cof Location: 43162-43951 bp Feature: domain Description: Cof Location: 431 62-43951 bp Feature: gene Location: 44500-45252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44710-45250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4471 0-45250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PurR (COG1609), Cof (COG0561), RVT-GII

Seq: JAARZT010000002.1 Listeria booriae strain FSL L7-0051 NODE_2_length_172980_cov_32.919446, whole genome shotgun sequence (172980 bp)
Overview 1 RT 1: 142322-149515 bp Neighborhood of RT #1 [142322, 149535] KOG1803 DNA2 RVT-UG2 SUKH_6 Feature: gene Location: 142322-143572 bp Feature: gene Location: 143707-146622 bp Feature: domain Description: KOG1803 Location: 144496-144727 bp Feature: domain Description: KOG1803 Location: 144496-14472 7 bp Feature: domain Description: DNA2 Location: 145726-146560 bp Feature: domain Description: DNA2 Location: 14572 6-146560 bp Feature: gene Location: 146728-148098 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 146905-147772 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 146905-147772 bp Feature: gene Location: 148705-148962 bp Feature: gene Location: 149092-149535 bp Feature: domain Description: SUKH_6 Location: 149107-149515 bp Feature: domain Description: SUKH_6 Location: 149107-149515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1803 (KOG1803, DNA helicase ), DNA2 (COG1112), RVT-UG2, SUKH_6 (pfam14568)

Seq: JAARZT010000074.1 Listeria booriae strain FSL L7-0051 NODE_74_length_736_cov_327.054187, whole genome shotgun sequence (736 bp)
Overview 1 RT 1: 82-565 bp Neighborhood of RT #1 [82, 735] RVT-GII GIIM Feature: gene Location: 82-735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100-283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100-283 bp Feature: domain Description: GIIM Note: maturase Location: 346-565 bp Feature: domain Description: GIIM Note: maturase Location: 3 46-565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)