myRT

myRT report for GCA_014230085.1_ASM1423008v1

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Seq: JACHVB010000021.1 Ruficoccus amylovorans strain JCM31066 Gn_363_184607_18122065, whole genome shotgun sequence (184607 bp)
Overview 1 RT 1: 176616-183530 bp Neighborhood of RT #1 [176616, 183598] XerC HTH_17 ParB RVT-CRISPR-like GIIM RVT_N RVT-GII HTH_XRE Feature: gene Location: 176616-178166 bp Feature: domain Description: XerC Location: 177153-178131 bp Feature: domain Description: XerC Location: 1 771 53-1 781 31 bp Feature: gene Location: 178285-179310 bp Feature: domain Description: HTH_17 Location: 178327-178480 bp Feature: domain Description: HTH_1 7 Location: 1 78327-1 78480 bp Feature: domain Description: ParB Location: 178726-178975 bp Feature: domain Description: ParB Location: 1 78726-1 78975 bp Feature: gene Location: 179313-180164 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 179355-179520 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 79355-1 79520 bp Feature: domain Description: GIIM Note: maturase Location: 179607-179838 bp Feature: domain Description: GIIM Note: maturase Location: 1 79607-1 79838 bp Feature: gene Location: 180022-180915 bp Feature: domain Description: RVT_N Location: 180052-180298 bp Feature: domain Description: RVT_N Location: 1 80052-1 80298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180340-180793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 80340-1 80793 bp Feature: gene Location: 181548-181865 bp Feature: gene Location: 183389-183598 bp Feature: domain Description: HTH_XRE Location: 183392-183530 bp Feature: domain Description: HTH_XRE Location: 1 83392-1 83530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), HTH_17 (pfam12728), ParB (smart00470), RVT-CRISPR, GIIM (pfam08388), RVT_N (pfam13655), RVT-GII, HTH_XRE (smart00530)