myRT

myRT report for GCA_014230105.1_ASM1423010v1

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Seq: JACLAJ010000015.1 Citrobacter braakii strain FF423 NODE_15_length_28296_cov_24.0971, whole genome shotgun sequence (28296 bp)
Overview 1 RT 1: 17797-20968 bp Neighborhood of RT #1 [17797, 20970] PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 17797-18480 bp Feature: domain Description: PRK10276 Location: 18100-18463 bp Feature: domain Description: PRK1 0276 Location: 1 81 00-1 8463 bp Feature: gene Location: 18634-18999 bp Feature: gene Location: 19111-20121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19117-19729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 1 7-1 9729 bp Feature: gene Location: 20273-20548 bp Feature: domain Description: InsA Location: 20276-20540 bp Feature: domain Description: InsA Location: 20276-20540 bp Feature: gene Location: 20593-20970 bp Feature: domain Description: DDE_Tnp_IS1 Location: 20596-20968 bp Feature: domain Description: DDE_Tnp_IS1 Location: 20596-20968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: JACLAJ010000002.1 Citrobacter braakii strain FF423 NODE_2_length_841525_cov_47.9341, whole genome shotgun sequence (841525 bp)
Overview 1 RT 1: 215523-224806 bp Neighborhood of RT #1 [215523, 224892] Arm-DNA-bind_3 INT_P4_C RVT-UG1 RT_Bac_retron_II HsdM RMtype1_S_StySKI-TRD2-CR2_like RMtype1_S_StySKI-TRD2-CR2_like Feature: gene Location: 215523-216932 bp Feature: domain Description: Arm-DNA-bind_3 Location: 215640-215907 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 15640-2 15907 bp Feature: domain Description: INT_P4_C Location: 216324-216873 bp Feature: domain Description: INT_P4_C Location: 2 1632 4-2 16873 bp Feature: gene Location: 216937-217113 bp Feature: gene Location: 217226-221002 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 217844-218351 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2 17844-2 18351 bp Feature: domain Description: RT_Bac_retron_II Location: 220145-220313 bp Feature: domain Description: RT_Bac_retron_II Location: 2 2 0145-2 2 0313 bp Feature: gene Location: 221210-223570 bp Feature: domain Description: HsdM Location: 221234-222638 bp Feature: domain Description: HsdM Location: 2 2 12 34-2 2 2 638 bp Feature: gene Location: 223570-224892 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 223936-224191 bp Feature: domain Description: RMtype1_S_StySKI-TRD2 -CR2 _like Location: 2 2 3936-2 2 4191 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 224227-224806 bp Feature: domain Description: RMtype1_S_StySKI-TRD2 -CR2 _like Location: 2 2 42 2 7-2 2 4806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-UG1, RT_Bac_retron_II (cd03487), HsdM (COG0286), RMtype1_S_StySKI-TRD2-CR2_like (cd17259)