myRT

myRT report for GCA_014235625.1_ASM1423562v1

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Seq: JACJHL010000072.1 Escherichia coli strain WP3-S18-ESBL-09 NODE_72_length_2329_cov_177.036, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 217-2193 bp Neighborhood of RT #1 [217, 2193] RVT-GII GIIM Feature: gene Location: 217-366 bp Feature: gene Location: 439-1689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1 300 bp Feature: domain Description: GIIM Note: maturase Location: 1381-1603 bp Feature: domain Description: GIIM Note: maturase Location: 1 381 -1 603 bp Feature: gene Location: 1713-2000 bp Feature: gene Location: 2053-2193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACJHL010000007.1 Escherichia coli strain WP3-S18-ESBL-09 NODE_7_length_204358_cov_139.658, whole genome shotgun sequence (204358 bp)
Overview 1 RT 1: 136611-142244 bp Neighborhood of RT #1 [136611, 142297] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 136611-136976 bp Feature: gene Location: 137624-139117 bp Feature: domain Description: PRK13889 Location: 137627-138227 bp Feature: domain Description: PRK13889 Location: 13762 7-1382 2 7 bp Feature: gene Location: 139255-140739 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 139618-140026 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 139618-14002 6 bp Feature: gene Location: 140868-141401 bp Feature: gene Location: 141809-142297 bp Feature: domain Description: DUF4755 Location: 141941-142244 bp Feature: domain Description: DUF4755 Location: 141941-142 2 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)