myRT

myRT report for GCA_014236675.1_ASM1423667v1

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Seq: JACCKZ010000002.1 Candidatus Petromonas tenebris isolate B6 scaffold_1, whole genome shotgun sequence (117394 bp)
Overview 1 RT 1: 48408-53531 bp Neighborhood of RT #1 [48408, 53531] PRK09414 GIIM RVT-GII PRK06851 Feature: gene Location: 48408-49751 bp Feature: domain Description: PRK09414 Location: 48417-49746 bp Feature: domain Description: PRK0941 4 Location: 4841 7-49746 bp Feature: gene Location: 50237-50578 bp Feature: domain Description: GIIM Note: maturase Location: 50240-50414 bp Feature: domain Description: GIIM Note: maturase Location: 50240-5041 4 bp Feature: gene Location: 50692-51654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51043-51631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 043-51 631 bp Feature: gene Location: 52114-53205 bp Feature: domain Description: PRK06851 Location: 52126-53194 bp Feature: domain Description: PRK06851 Location: 521 26-531 94 bp Feature: gene Location: 53394-53531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09414 (NADP-specific glutamate dehydrogenase), GIIM (pfam08388), RVT-GII, PRK06851 (hypothetical protein; Provisional)

Seq: JACCKZ010000020.1 Candidatus Petromonas tenebris isolate B6 scaffold_27, whole genome shotgun sequence (70916 bp)
Overview 1 RT 1: 30757-35710 bp Neighborhood of RT #1 [30757, 35730] TDH gly_Cac_T_rel RVT-GII GIIM DUF503 Nth Feature: gene Location: 30757-31614 bp Feature: domain Description: TDH Location: 30760-31600 bp Feature: domain Description: TDH Location: 30760-31600 bp Feature: gene Location: 31849-33039 bp Feature: domain Description: gly_Cac_T_rel Location: 31879-33034 bp Feature: domain Description: gly_Cac_T_rel Location: 31879-33034 bp Feature: gene Location: 33392-34057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33395-33701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33395-33701 bp Feature: domain Description: GIIM Note: maturase Location: 33782-33992 bp Feature: domain Description: GIIM Note: maturase Location: 33782 -33992 bp Feature: gene Location: 34489-34770 bp Feature: domain Description: DUF503 Location: 34498-34756 bp Feature: domain Description: DUF503 Location: 34498-34756 bp Feature: gene Location: 35062-35730 bp Feature: domain Description: Nth Location: 35092-35710 bp Feature: domain Description: Nth Location: 35092 -35710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TDH (pfam03347), gly_Cac_T_rel (TIGR01825), RVT-GII, GIIM (pfam08388), DUF503 (pfam04456), Nth (COG0177)

Seq: JACCKZ010000009.1 Candidatus Petromonas tenebris isolate B6 scaffold_8, whole genome shotgun sequence (106520 bp)
Overview 1 RT 1: 2208-10389 bp Neighborhood of RT #1 [2208, 10505] PRK05290 CxxC_CxxC_SSSS RVT-GII pyruv_ox_red Methyltransf_32 KOG2811 Feature: gene Location: 2208-3878 bp Feature: domain Description: PRK05290 Location: 2229-3855 bp Feature: domain Description: PRK05290 Location: 2229-3 855 bp Feature: gene Location: 4063-4275 bp Feature: domain Description: CxxC_CxxC_SSSS Location: 4087-4222 bp Feature: domain Description: CxxC_CxxC_SSSS Location: 4087-4222 bp Feature: gene Location: 4421-4900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4469-4895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4469-4895 bp Feature: gene Location: 5657-9202 bp Feature: domain Description: pyruv_ox_red Location: 5675-9191 bp Feature: domain Description: pyruv_ox_red Location: 5675-9191 bp Feature: gene Location: 9330-10505 bp Feature: domain Description: Methyltransf_32 Location: 9792-10200 bp Feature: domain Description: Methyltransf_3 2 Location: 9792-10200 bp Feature: domain Description: KOG2811 Location: 10269-10389 bp Feature: domain Description: KOG2811 Location: 10269-103 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05290 (hybrid cluster protein; Provisional), CxxC_CxxC_SSSS (TIGR02605), RVT-GII, pyruv_ox_red (TIGR02176), Methyltransf_32 (pfam13679), KOG2811 (KOG2811, Uncharacterized conserved protein )

Seq: JACCKZ010000032.1 Candidatus Petromonas tenebris isolate B6 scaffold_80, whole genome shotgun sequence (38870 bp)
Overview 1 RT 1: 18332-22345 bp Neighborhood of RT #1 [18332, 22345] COG3666 GIIM RVT-GII Transaldolase_FSA Feature: gene Location: 18332-19222 bp Feature: domain Description: COG3666 Location: 18383-18842 bp Feature: domain Description: COG3666 Location: 18383-1884 2 bp Feature: gene Location: 19434-19631 bp Feature: domain Description: GIIM Note: maturase Location: 19437-19566 bp Feature: domain Description: GIIM Note: maturase Location: 194 37-19566 bp Feature: gene Location: 19700-20722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20000-20633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20000-20633 bp Feature: gene Location: 21273-21950 bp Feature: domain Description: Transaldolase_FSA Location: 21285-21915 bp Feature: domain Description: Transaldolase_FSA Location: 21285-21915 bp Feature: gene Location: 22073-22345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), GIIM (pfam08388), RVT-GII, Transaldolase_FSA (cd00956)