myRT

myRT report for GCA_014236755.1_ASM1423675v1

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Seq: JACCKY010000033.1 Candidatus Petromonas tenebris isolate A2 scaffold_128, whole genome shotgun sequence (20779 bp)
Overview 1 RT 1: 10280-18554 bp Neighborhood of RT #1 [10280, 18577] Methyltransf_32 KOG2811 pyruv_ox_red RVT-GII CxxC_CxxC_SSSS PRK05290 Feature: gene Location: 10280-11455 bp Feature: domain Description: Methyltransf_32 Location: 10742-11150 bp Feature: domain Description: Methyltransf_32 Location: 1 0742-1 1 1 50 bp Feature: domain Description: KOG2811 Location: 11219-11339 bp Feature: domain Description: KOG281 1 Location: 1 1 21 9-1 1 339 bp Feature: gene Location: 11583-15128 bp Feature: domain Description: pyruv_ox_red Location: 11601-15117 bp Feature: domain Description: pyruv_ox_red Location: 1 1 601 -1 51 1 7 bp Feature: gene Location: 15885-16364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15933-16359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5933-1 6359 bp Feature: gene Location: 16510-16722 bp Feature: domain Description: CxxC_CxxC_SSSS Location: 16534-16669 bp Feature: domain Description: CxxC_CxxC_SSSS Location: 1 6534-1 6669 bp Feature: gene Location: 16907-18577 bp Feature: domain Description: PRK05290 Location: 16928-18554 bp Feature: domain Description: PRK05290 Location: 1 6928-1 8554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_32 (pfam13679), KOG2811 (KOG2811, Uncharacterized conserved protein ), pyruv_ox_red (TIGR02176), RVT-GII, CxxC_CxxC_SSSS (TIGR02605), PRK05290 (hybrid cluster protein; Provisional)

Seq: JACCKY010000037.1 Candidatus Petromonas tenebris isolate A2 scaffold_144, whole genome shotgun sequence (18938 bp)
Overview 1 RT 1: 1-3281 bp Neighborhood of RT #1 [1, 3281] GIIM RVT-GII Transaldolase_FSA Feature: gene Location: 1-162 bp Feature: gene Location: 370-567 bp Feature: domain Description: GIIM Note: maturase Location: 373-502 bp Feature: domain Description: GIIM Note: maturase Location: 373-502 bp Feature: gene Location: 636-1658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 936-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 936-1569 bp Feature: gene Location: 2209-2886 bp Feature: domain Description: Transaldolase_FSA Location: 2221-2851 bp Feature: domain Description: Transaldolase_FSA Location: 2 2 2 1-2 851 bp Feature: gene Location: 3009-3281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transaldolase_FSA (cd00956), GIIM (pfam08388), RVT-GII

Seq: JACCKY010000102.1 Candidatus Petromonas tenebris isolate A2 scaffold_1474, whole genome shotgun sequence (1754 bp)
Overview 1 RT 1: 3-1318 bp Neighborhood of RT #1 [3, 1318] RVT-GII Feature: gene Location: 3-917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-83 7 bp Feature: gene Location: 1103-1318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACCKY010000005.1 Candidatus Petromonas tenebris isolate A2 scaffold_17, whole genome shotgun sequence (56902 bp)
Overview 1 RT 1: 40167-49241 bp Neighborhood of RT #1 [40167, 49957] PRK00024 RVT-GII GIIM COG4646 KOG1000 Feature: gene Location: 40167-40877 bp Feature: domain Description: PRK00024 Location: 40371-40767 bp Feature: domain Description: PRK00024 Location: 4 0371-4 0767 bp Feature: gene Location: 40879-41127 bp Feature: gene Location: 41225-42553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41486-42104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 14 86-4 2104 bp Feature: domain Description: GIIM Note: maturase Location: 42164-42383 bp Feature: domain Description: GIIM Note: maturase Location: 4 2164 -4 2383 bp Feature: gene Location: 42649-42837 bp Feature: gene Location: 43091-49957 bp Feature: domain Description: COG4646 Location: 46061-48653 bp Feature: domain Description: COG4 64 6 Location: 4 6061-4 8653 bp Feature: domain Description: KOG1000 Location: 49007-49241 bp Feature: domain Description: KOG1000 Location: 4 9007-4 924 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT-GII, GIIM (pfam08388), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: JACCKY010000017.1 Candidatus Petromonas tenebris isolate A2 scaffold_46, whole genome shotgun sequence (85354 bp)
Overview 1 RT 1: 44990-50148 bp Neighborhood of RT #1 [44990, 50168] TDH gly_Cac_T_rel RVT-GII GIIM DUF503 Nth Feature: gene Location: 44990-46039 bp Feature: domain Description: TDH Location: 45005-46025 bp Feature: domain Description: TDH Location: 45 005 -46025 bp Feature: gene Location: 46274-47464 bp Feature: domain Description: gly_Cac_T_rel Location: 46304-47459 bp Feature: domain Description: gly_Cac_T_rel Location: 46304-4745 9 bp Feature: gene Location: 47817-48482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47820-48126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47820-48126 bp Feature: domain Description: GIIM Note: maturase Location: 48204-48417 bp Feature: domain Description: GIIM Note: maturase Location: 48204-48417 bp Feature: gene Location: 48927-49208 bp Feature: domain Description: DUF503 Location: 48936-49194 bp Feature: domain Description: DUF5 03 Location: 48936-49194 bp Feature: gene Location: 49500-50168 bp Feature: domain Description: Nth Location: 49530-50148 bp Feature: domain Description: Nth Location: 495 30-5 0148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TDH (pfam03347), gly_Cac_T_rel (TIGR01825), RVT-GII, GIIM (pfam08388), DUF503 (pfam04456), Nth (COG0177)

Seq: JACCKY010000002.1 Candidatus Petromonas tenebris isolate A2 scaffold_8, whole genome shotgun sequence (134788 bp)
Overview 1 RT 1: 81384-85020 bp Neighborhood of RT #1 [81384, 85020] PRK06851 RVT-GII GIIM Feature: gene Location: 81384-81548 bp Feature: gene Location: 81584-82675 bp Feature: domain Description: PRK06851 Location: 81596-82664 bp Feature: domain Description: PRK06 851 Location: 81596 -826 6 4 bp Feature: gene Location: 83134-84096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83485-84073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83485-84073 bp Feature: gene Location: 84210-84413 bp Feature: domain Description: GIIM Note: maturase Location: 84213-84387 bp Feature: domain Description: GIIM Note: maturase Location: 84213-84387 bp Feature: gene Location: 84883-85020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06851 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388)