myRT

myRT report for GCA_014239125.1_ASM1423912v1

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Seq: JAAZZS010000021.1 Faecalibaculum rodentium isolate bin55p NODE_21_length_14184_cov_4.752141, whole genome shotgun sequence (14184 bp)
Overview 1 RT 1: 278-5640 bp Neighborhood of RT #1 [278, 5681] RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom KOG2991 AmyAc_arch_bac_AmyA Bac_A_amyl_C Feature: gene Location: 278-406 bp Feature: gene Location: 1146-2453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1347-1965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 347-1 965 bp Feature: domain Description: GIIM Note: maturase Location: 2019-2229 bp Feature: domain Description: GIIM Note: maturase Location: 201 9-2229 bp Feature: gene Location: 2516-4000 bp Feature: domain Description: Resolvase Location: 2525-2936 bp Feature: domain Description: Resolvase Location: 2525-2936 bp Feature: domain Description: Recombinase Location: 3005-3326 bp Feature: domain Description: Recombinase Location: 3005-3326 bp Feature: domain Description: Zn_ribbon_recom Location: 3365-3548 bp Feature: domain Description: Zn_ribbon_recom Location: 3365-3548 bp Feature: domain Description: KOG2991 Location: 3629-3833 bp Feature: domain Description: KOG2991 Location: 3629-3833 bp Feature: gene Location: 4275-5681 bp Feature: domain Description: AmyAc_arch_bac_AmyA Location: 4407-5424 bp Feature: domain Description: AmyAc_arch_bac_AmyA Location: 4407-5424 bp Feature: domain Description: Bac_A_amyl_C Location: 5508-5640 bp Feature: domain Description: Bac_A_amyl_C Location: 5508-5640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), KOG2991 (KOG2991, Splicing regulator )

Seq: JAAZZS010000025.1 Faecalibaculum rodentium isolate bin55p NODE_25_length_13524_cov_4.605539, whole genome shotgun sequence (13524 bp)
Overview 1 RT 1: 434-6990 bp Neighborhood of RT #1 [434, 7004] TPM_phosphatase PspA RVT-GII GIIM RnjA Def Feature: gene Location: 434-1549 bp Feature: domain Description: TPM_phosphatase Location: 956-1280 bp Feature: domain Description: TPM_phosphatase Location: 956-12 80 bp Feature: gene Location: 1556-2230 bp Feature: domain Description: PspA Location: 1559-2225 bp Feature: domain Description: PspA Location: 1559-2 2 2 5 bp Feature: gene Location: 2823-4136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3024-3642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 4-3642 bp Feature: domain Description: GIIM Note: maturase Location: 3696-3906 bp Feature: domain Description: GIIM Note: maturase Location: 3696-3906 bp Feature: gene Location: 4341-6254 bp Feature: domain Description: RnjA Location: 4419-6063 bp Feature: domain Description: RnjA Location: 4419-6063 bp Feature: gene Location: 6444-7004 bp Feature: domain Description: Def Location: 6456-6990 bp Feature: domain Description: Def Location: 6456-6990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PspA (COG1842), RVT-GII, GIIM (pfam08388), TPM_phosphatase (pfam04536), Def (COG0242)

Seq: JAAZZS010000289.1 Faecalibaculum rodentium isolate bin55p NODE_289_length_918_cov_25.819235, whole genome shotgun sequence (918 bp)
Overview 1 RT 1: 402-903 bp Neighborhood of RT #1 [402, 917] RVT-GII Feature: gene Location: 402-917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633-903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 3 -903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAZZS010000003.1 Faecalibaculum rodentium isolate bin55p NODE_3_length_31502_cov_5.794232, whole genome shotgun sequence (31502 bp)
Overview 1 RT 1: 19156-24512 bp Neighborhood of RT #1 [19156, 24781] AcrR CPBP RVT-GII GIIM PTS_IIA COG3547 Feature: gene Location: 19156-19779 bp Feature: domain Description: AcrR Location: 19186-19654 bp Feature: domain Description: AcrR Location: 19186-19654 bp Feature: gene Location: 19776-20507 bp Feature: domain Description: CPBP Location: 20112-20379 bp Feature: domain Description: CPBP Location: 20112-20379 bp Feature: gene Location: 20646-22055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20964-21579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20964 -21579 bp Feature: domain Description: GIIM Note: maturase Location: 21636-21855 bp Feature: domain Description: GIIM Note: maturase Location: 21636-21855 bp Feature: gene Location: 22508-22828 bp Feature: domain Description: PTS_IIA Location: 22529-22805 bp Feature: domain Description: PTS_IIA Location: 22529-22805 bp Feature: gene Location: 23360-24781 bp Feature: domain Description: COG3547 Location: 23552-24512 bp Feature: domain Description: COG354 7 Location: 23552-24 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), CPBP, RVT-GII, GIIM (pfam08388), PTS_IIA (pfam02255), COG3547 (Transposase )

Seq: JAAZZS010000045.1 Faecalibaculum rodentium isolate bin55p NODE_45_length_10963_cov_4.553630, whole genome shotgun sequence (10963 bp)
Overview 1 RT 1: 9488-10595 bp Neighborhood of RT #1 [9488, 10960] arc_metj arc_metj RelE RVT-GII Feature: gene Location: 9488-9721 bp Feature: domain Description: arc_metj Location: 9512-9626 bp Feature: domain Description: arc_metj Location: 95 12-9626 bp Feature: domain Description: arc_metj Location: 9644-9710 bp Feature: domain Description: arc_metj Location: 9644-9710 bp Feature: gene Location: 9723-9995 bp Feature: domain Description: RelE Location: 9726-9993 bp Feature: domain Description: RelE Location: 9726-9993 bp Feature: gene Location: 10214-10960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10217-10595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10217-105 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, arc_metj (LOAD_arc_metj), RelE (pfam06296)