myRT

myRT report for GCA_014256275.1_ASM1425627v1

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Seq: JACCFE010000002.1 (7821090 bp)
Overview 1 RT 1: 72149-78158 bp 2 RT 2: 7671791-7676341 bp 3 RT 3: 7742916-7749584 bp Neighborhood of RT #1 [72149, 78175] HTH_32 RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like RVT-GII Nterm_IS4 DDE_Tnp_1 PRK07851 Neighborhood of RT #2 [7671791, 7676341] DEDD_Tnp_IS110 RVT-GII GIIM DDE_5 Neighborhood of RT #3 [7742916, 7749584] PRK07851 Nterm_IS4 DDE_Tnp_1 RVT-GII Phage_int_SAM_1 INT_RitC_C_like RVT-GII GIIM HTH_32 Feature: gene Location: 72149-72517 bp Feature: domain Description: HTH_32 Location: 72221-72377 bp Feature: domain Description: HTH_32 Location: 72221 -72377 bp Feature: gene Location: 72595-72840 bp Feature: gene Location: 72965-73504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72971-73127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72971 -731 27 bp Feature: domain Description: GIIM Note: maturase Location: 73211-73442 bp Feature: domain Description: GIIM Note: maturase Location: 7321 1 -73442 bp Feature: gene Location: 73659-74618 bp Feature: domain Description: Phage_int_SAM_1 Location: 73695-73941 bp Feature: domain Description: Phage_int_SAM_1 Location: 73695-73941 bp Feature: domain Description: INT_RitC_C_like Location: 74031-74541 bp Feature: domain Description: INT_RitC_C_like Location: 74031 -74541 bp Feature: gene Location: 74615-75400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74825-75308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74825-75308 bp Feature: gene Location: 76058-77245 bp Feature: domain Description: Nterm_IS4 Location: 76097-76388 bp Feature: domain Description: Nterm_IS4 Location: 76097-76388 bp Feature: domain Description: DDE_Tnp_1 Location: 76442-77117 bp Feature: domain Description: DDE_Tnp_1 Location: 76442-771 1 7 bp Feature: gene Location: 77735-78175 bp Feature: domain Description: PRK07851 Location: 77738-78158 bp Feature: domain Description: PRK07851 Location: 77738-781 58 bp Feature: gene Location: 7671791-7672054 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 7671794-7672049 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 7671 794-7672049 bp Feature: gene Location: 7672576-7672716 bp Feature: gene Location: 7672713-7673444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7672716-7673013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767271 6-767301 3 bp Feature: domain Description: GIIM Note: maturase Location: 7673100-7673310 bp Feature: domain Description: GIIM Note: maturase Location: 76731 00-767331 0 bp Feature: gene Location: 7673699-7674955 bp Feature: domain Description: DDE_5 Location: 7673759-7674569 bp Feature: domain Description: DDE_5 Location: 7673759-7674569 bp Feature: gene Location: 7675337-7676341 bp Feature: gene Location: 7742916-7743356 bp Feature: domain Description: PRK07851 Location: 7742919-7743339 bp Feature: domain Description: PRK07851 Location: 774291 9-7743339 bp Feature: gene Location: 7743846-7745033 bp Feature: domain Description: Nterm_IS4 Location: 7743885-7744176 bp Feature: domain Description: Nterm_IS4 Location: 7743885-77441 76 bp Feature: domain Description: DDE_Tnp_1 Location: 7744230-7744905 bp Feature: domain Description: DDE_Tnp_1 Location: 7744230-7744905 bp Feature: gene Location: 7745691-7746476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7745901-7746384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7745901 -7746384 bp Feature: gene Location: 7746473-7747432 bp Feature: domain Description: Phage_int_SAM_1 Location: 7746509-7746755 bp Feature: domain Description: Phage_int_SAM_1 Location: 7746509-7746755 bp Feature: domain Description: INT_RitC_C_like Location: 7746845-7747355 bp Feature: domain Description: INT_RitC_C_like Location: 7746845-7747355 bp Feature: gene Location: 7747575-7748126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7747578-7747749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7747578-7747749 bp Feature: domain Description: GIIM Note: maturase Location: 7747833-7748064 bp Feature: domain Description: GIIM Note: maturase Location: 7747833-7748064 bp Feature: gene Location: 7748574-7748942 bp Feature: domain Description: HTH_32 Location: 7748646-7748802 bp Feature: domain Description: HTH_32 Location: 7748646-7748802 bp Feature: gene Location: 7749213-7749584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), Nterm_IS4 (pfam13006), DDE_Tnp_1 (pfam01609), PRK07851 (acetyl-CoA C-acetyltransferase), DEDD_Tnp_IS110 (pfam01548), DDE_5 (pfam13546)