myRT

myRT report for GCA_014268755.1_ASM1426875v1

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Seq: JABWRC010000028.1 (90057 bp)
Overview 1 RT 1: 28343-37117 bp Neighborhood of RT #1 [28343, 37149] NTP_transferase_like_1 COG3178 RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 28343-29017 bp Feature: domain Description: NTP_transferase_like_1 Location: 28349-28988 bp Feature: domain Description: NTP_transferase_like_1 Location: 28349-28988 bp Feature: gene Location: 29014-30039 bp Feature: domain Description: COG3178 Location: 29089-30031 bp Feature: domain Description: COG31 78 Location: 29089-30031 bp Feature: gene Location: 31163-32857 bp Feature: domain Description: RVT_N Location: 31220-31454 bp Feature: domain Description: RVT_N Location: 31 220-31 454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31508-32141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 508-321 41 bp Feature: domain Description: GIIM Note: maturase Location: 32195-32426 bp Feature: domain Description: GIIM Note: maturase Location: 321 95-32426 bp Feature: domain Description: HNH Note: nucleases Location: 32678-32816 bp Feature: domain Description: HNH Note: nucleases Location: 32678-3281 6 bp Feature: gene Location: 33051-35852 bp Feature: domain Description: LptD Location: 33453-35835 bp Feature: domain Description: LptD Location: 33453-35835 bp Feature: gene Location: 35869-37149 bp Feature: domain Description: PRK10770 Location: 35908-37117 bp Feature: domain Description: PRK1 0770 Location: 35908-371 1 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: JABWRC010000025.1 (96036 bp)
Overview 1 RT 1: 9790-20163 bp Neighborhood of RT #1 [9790, 20195] NERD STKc_PknB_like STKc_PknB_like KOG1802 KOG1802 RVT-UG2 TnpB_IS66 Feature: gene Location: 9790-14823 bp Feature: domain Description: NERD Location: 9925-10258 bp Feature: domain Description: NERD Location: 992 5-102 58 bp Feature: domain Description: STKc_PknB_like Location: 10777-11281 bp Feature: domain Description: STKc_PknB_like Location: 10777-112 81 bp Feature: domain Description: STKc_PknB_like Location: 11557-11800 bp Feature: domain Description: STKc_PknB_like Location: 11557-11800 bp Feature: domain Description: KOG1802 Location: 12820-13318 bp Feature: domain Description: KOG1802 Location: 12 82 0-13318 bp Feature: domain Description: KOG1802 Location: 13780-14704 bp Feature: domain Description: KOG1802 Location: 13780-14704 bp Feature: gene Location: 14823-16262 bp Feature: gene Location: 16943-18226 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 17135-17921 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 17135-1792 1 bp Feature: gene Location: 19579-19839 bp Feature: gene Location: 19860-20195 bp Feature: domain Description: TnpB_IS66 Location: 19878-20163 bp Feature: domain Description: TnpB_IS66 Location: 19878-2 0163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), STKc_PknB_like (cd14014), KOG1802 (KOG1802, RNA helicase nonsense mRNA reducing factor (pNORF1) ), RVT-UG2, TnpB_IS66 (pfam05717)