myRT

myRT report for GCA_014284495.1_ASM1428449v1

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Seq: WJBE01000002.1 (368117 bp)
Overview 1 RT 1: 39786-46515 bp Neighborhood of RT #1 [39786, 46535] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RadC RVT-UG2 TIR-like PHA02517 Feature: gene Location: 39786-41330 bp Feature: domain Description: LZ_Tnp_IS66 Location: 39861-40083 bp Feature: domain Description: LZ_Tnp_IS66 Location: 39861 -40083 bp Feature: domain Description: zf-IS66 Location: 40110-40242 bp Feature: domain Description: zf-IS66 Location: 401 1 0-40242 bp Feature: domain Description: DDE_Tnp_IS66 Location: 40299-41154 bp Feature: domain Description: DDE_Tnp_IS66 Location: 40299-41 1 54 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 41175-41298 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 41 1 75-41 298 bp Feature: gene Location: 41537-41995 bp Feature: domain Description: RadC Location: 41630-41987 bp Feature: domain Description: RadC Location: 41 630-41 987 bp Feature: gene Location: 42174-43598 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 42465-43311 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 42465-4331 1 bp Feature: gene Location: 44035-45078 bp Feature: domain Description: TIR-like Location: 44647-44998 bp Feature: domain Description: TIR-like Location: 44647-44998 bp Feature: gene Location: 45213-46535 bp Feature: domain Description: PHA02517 Location: 45726-46515 bp Feature: domain Description: PHA0251 7 Location: 45726-4651 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RadC (pfam04002), RVT-UG2, TIR-like (pfam10137), PHA02517 (putative transposase OrfB; Reviewed)

Seq: WJBE01000015.1 (83126 bp)
Overview 1 RT 1: 8493-14266 bp Neighborhood of RT #1 [8493, 14307] DUF2284 DUF3786 RVT-GII GIIM SDR_c CHASE GGDEF Feature: gene Location: 8493-9035 bp Feature: domain Description: DUF2284 Location: 8559-9027 bp Feature: domain Description: DUF2 2 84 Location: 8559-902 7 bp Feature: gene Location: 9046-9678 bp Feature: domain Description: DUF3786 Location: 9109-9631 bp Feature: domain Description: DUF3786 Location: 9109-9631 bp Feature: gene Location: 10494-11717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10665-11286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10665-112 86 bp Feature: domain Description: GIIM Note: maturase Location: 11328-11559 bp Feature: domain Description: GIIM Note: maturase Location: 1132 8-11559 bp Feature: gene Location: 11965-12765 bp Feature: domain Description: SDR_c Location: 11992-12652 bp Feature: domain Description: SDR_c Location: 11992 -12 652 bp Feature: gene Location: 12934-14307 bp Feature: domain Description: CHASE Location: 12967-13561 bp Feature: domain Description: CHASE Location: 12 967-13561 bp Feature: domain Description: GGDEF Location: 13807-14266 bp Feature: domain Description: GGDEF Location: 13807-142 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2284 (pfam10050), DUF3786 (pfam12654), RVT-GII, GIIM (pfam08388), SDR_c (cd05233), CHASE (smart01079), GGDEF (TIGR00254)