myRT

myRT report for GCA_014287515.1_ASM1428751v1

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Seq: JACOPI010000055.1 (1727 bp)
Overview 1 RT 1: 1-1725 bp Neighborhood of RT #1 [1, 1725] RVT-GII GIIM Feature: gene Location: 1-1239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211-826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 -826 bp Feature: domain Description: GIIM Note: maturase Location: 886-1102 bp Feature: domain Description: GIIM Note: maturase Location: 886-1 1 02 bp Feature: gene Location: 1226-1363 bp Feature: gene Location: 1444-1725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACOPI010000023.1 (71954 bp)
Overview 1 RT 1: 61445-64839 bp Neighborhood of RT #1 [61445, 64922] RVT-UG27 DUF3846 Feature: gene Location: 61445-61798 bp Feature: gene Location: 61932-62735 bp Feature: gene Location: 62741-64366 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 62990-63551 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 62 990-63551 bp Feature: gene Location: 64302-64544 bp Feature: gene Location: 64557-64922 bp Feature: domain Description: DUF3846 Location: 64569-64839 bp Feature: domain Description: DUF3846 Location: 64569-64839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, DUF3846 (pfam12957)

Seq: JACOPI010000020.1 (87202 bp)
Overview 1 RT 1: 81716-84170 bp Neighborhood of RT #1 [81716, 84170] Acetyltransf_10 group_II_RT_mat RVT-GII Feature: gene Location: 81716-82189 bp Feature: domain Description: Acetyltransf_10 Location: 81821-82166 bp Feature: domain Description: Acetyltransf_10 Location: 81821-82166 bp Feature: gene Location: 82345-82827 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 82348-82735 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 823 48-8273 5 bp Feature: gene Location: 82954-83643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83209-83635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 209-83 63 5 bp Feature: gene Location: 83694-83867 bp Feature: gene Location: 83871-84170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), group_II_RT_mat (TIGR04416), RVT-GII

Seq: JACOPI010000006.1 (190264 bp)
Overview 1 RT 1: 112241-117431 bp Neighborhood of RT #1 [112241, 117431] Cas2_I_II_III RVT-CRISPR cas1_HMARI DUF3837 Feature: gene Location: 112241-112603 bp Feature: gene Location: 112623-112955 bp Feature: domain Description: Cas2_I_II_III Location: 112704-112926 bp Feature: domain Description: Cas2_I_II_III Location: 112704 -112926 bp Feature: gene Location: 113242-115149 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 113452-114034 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1134 52-114 034 bp Feature: domain Description: cas1_HMARI Location: 114169-115141 bp Feature: domain Description: cas1_HMARI Location: 114 169-11514 1 bp Feature: gene Location: 116461-116796 bp Feature: domain Description: DUF3837 Location: 116464-116761 bp Feature: domain Description: DUF3837 Location: 1164 64 -116761 bp Feature: gene Location: 117243-117431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641), DUF3837 (pfam12939)