myRT

myRT report for GCA_014324315.1_ASM1432431v1

Download annotations/find similar RTs

Seq: VJOX01000013.1 (49457 bp)
Overview 1 RT 1: 2230-6301 bp Neighborhood of RT #1 [2230, 6354] PRK09870 RVT-GII RVT-GII GIIM SalY AcrA Feature: gene Location: 2230-2430 bp Feature: gene Location: 2634-2954 bp Feature: domain Description: PRK09870 Location: 2691-2949 bp Feature: domain Description: PRK09870 Location: 2691 -2949 bp Feature: gene Location: 3108-3383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3111-3369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 1 -3369 bp Feature: gene Location: 3397-3747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3403-3493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3403-3493 bp Feature: domain Description: GIIM Note: maturase Location: 3577-3724 bp Feature: domain Description: GIIM Note: maturase Location: 3577-3724 bp Feature: gene Location: 3828-5009 bp Feature: domain Description: SalY Location: 3891-5007 bp Feature: domain Description: SalY Location: 3891 -5007 bp Feature: gene Location: 5113-6354 bp Feature: domain Description: AcrA Location: 5137-6301 bp Feature: domain Description: AcrA Location: 51 37-6301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09870 (tyrosine recombinase; Provisional), RVT-GII, GIIM (pfam08388), SalY (COG0577), AcrA (COG0845)

Seq: VJOX01000340.1 (1407 bp)
Overview 1 RT 1: 1-1140 bp Neighborhood of RT #1 [1, 1253] M28_like RVT_N RVT-GII Feature: gene Location: 1-210 bp Feature: domain Description: M28_like Location: 7-163 bp Feature: domain Description: M2 8_like Location: 7-163 bp Feature: gene Location: 356-541 bp Feature: gene Location: 720-1253 bp Feature: domain Description: RVT_N Location: 756-996 bp Feature: domain Description: RVT_N Location: 756-996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053-1140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M28_like (cd08656), RVT_N (pfam13655), RVT-GII

Seq: VJOX01001238.1 (557 bp)
Overview 1 RT 1: 37-229 bp Neighborhood of RT #1 [37, 237] RVT-GII Feature: gene Location: 37-237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46-229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VJOX01000330.1 (4967 bp)
Overview 1 RT 1: 259-3355 bp Neighborhood of RT #1 [259, 3471] RVT-GII Gph NurA Feature: gene Location: 259-699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-54 7 bp Feature: gene Location: 1176-1961 bp Feature: domain Description: Gph Location: 1206-1914 bp Feature: domain Description: Gph Location: 1206-1914 bp Feature: gene Location: 2296-3471 bp Feature: domain Description: NurA Location: 2539-3355 bp Feature: domain Description: NurA Location: 2539-3355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Gph (COG0546), NurA (smart00933)

Seq: VJOX01001276.1 (18532 bp)
Overview 1 RT 1: 13822-18319 bp Neighborhood of RT #1 [13822, 18319] RVT_N RVT-GII GIIM McrA Acetyltransf_10 Feature: gene Location: 13822-14091 bp Feature: gene Location: 14276-14815 bp Feature: gene Location: 14961-16769 bp Feature: domain Description: RVT_N Location: 15090-15336 bp Feature: domain Description: RVT_N Location: 15 090-15 336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15378-16053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 378-1605 3 bp Feature: domain Description: GIIM Note: maturase Location: 16152-16386 bp Feature: domain Description: GIIM Note: maturase Location: 1615 2-16386 bp Feature: domain Description: McrA Location: 16476-16755 bp Feature: domain Description: McrA Location: 16476-1675 5 bp Feature: gene Location: 17242-17778 bp Feature: domain Description: Acetyltransf_10 Location: 17593-17764 bp Feature: domain Description: Acetyltransf_10 Location: 175 93-17764 bp Feature: gene Location: 17822-18319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Acetyltransf_10 (pfam13673)

Seq: VJOX01000425.1 (1209 bp)
Overview 1 RT 1: 47-1049 bp Neighborhood of RT #1 [47, 1069] RVT-GII McrA Feature: gene Location: 47-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53-485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53-485 bp Feature: domain Description: McrA Location: 716-1049 bp Feature: domain Description: McrA Location: 716 -1049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058)

Seq: VJOX01000087.1 (1468 bp)
Overview 1 RT 1: 186-1297 bp Neighborhood of RT #1 [186, 1356] RVT_N RVT-GII Feature: gene Location: 186-371 bp Feature: gene Location: 730-1356 bp Feature: domain Description: RVT_N Location: 766-1006 bp Feature: domain Description: RVT_N Location: 7 66-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063-1297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063-1297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: VJOX01000880.1 (5259 bp)
Overview 1 RT 1: 674-3969 bp Neighborhood of RT #1 [674, 3969] YfmG Avd_like RVT-DGRs Feature: gene Location: 674-1513 bp Feature: domain Description: YfmG Location: 710-1496 bp Feature: domain Description: YfmG Location: 710-1496 bp Feature: gene Location: 1669-2013 bp Feature: domain Description: Avd_like Location: 1687-1993 bp Feature: domain Description: Avd_like Location: 168 7-1993 bp Feature: gene Location: 2175-3092 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2241-2883 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2241-28 8 3 bp Feature: gene Location: 3240-3566 bp Feature: gene Location: 3676-3969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Avd_like (cd16376), RVT-DGRs

Seq: VJOX01003057.1 (1145 bp)
Overview 1 RT 1: 7-925 bp Neighborhood of RT #1 [7, 1143] RVT-GII GIIM Feature: gene Location: 7-1143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-59 2 bp Feature: domain Description: GIIM Note: maturase Location: 697-925 bp Feature: domain Description: GIIM Note: maturase Location: 69 7-9 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VJOX01001944.1 (11957 bp)
Overview 1 RT 1: 7918-11730 bp Neighborhood of RT #1 [7918, 11730] DUF4351 RVT-GII GIIM McrA Feature: gene Location: 7918-8814 bp Feature: domain Description: DUF4351 Location: 8623-8797 bp Feature: domain Description: DUF4351 Location: 8623-8797 bp Feature: gene Location: 8883-9104 bp Feature: gene Location: 9429-10376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9435-9618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9435-9618 bp Feature: domain Description: GIIM Note: maturase Location: 9717-9951 bp Feature: domain Description: GIIM Note: maturase Location: 9717-9951 bp Feature: domain Description: McrA Location: 10041-10332 bp Feature: domain Description: McrA Location: 10 041-10 332 bp Feature: gene Location: 11383-11730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4351 (pfam14261), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: VJOX01000263.1 (3017 bp)
Overview 1 RT 1: 862-2973 bp Neighborhood of RT #1 [862, 2981] RVT_N RVT-GII Feature: gene Location: 862-1146 bp Feature: gene Location: 1364-1744 bp Feature: gene Location: 2385-2981 bp Feature: domain Description: RVT_N Location: 2421-2658 bp Feature: domain Description: RVT_N Location: 2421-2658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2718-2973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2718-2973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: VJOX01000148.1 (10179 bp)
Overview 1 RT 1: 45-3704 bp Neighborhood of RT #1 [45, 3742] RVT-GII McrA PRK02627 Ion_trans_2 TrkA Feature: gene Location: 45-752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60-168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60-168 bp Feature: domain Description: McrA Location: 399-729 bp Feature: domain Description: McrA Location: 399-729 bp Feature: gene Location: 977-2287 bp Feature: domain Description: PRK02627 Location: 1058-2249 bp Feature: domain Description: PRK02627 Location: 1058-2249 bp Feature: gene Location: 2726-3742 bp Feature: domain Description: Ion_trans_2 Location: 2750-2963 bp Feature: domain Description: Ion_trans_2 Location: 2750-2963 bp Feature: domain Description: TrkA Location: 3035-3704 bp Feature: domain Description: TrkA Location: 3035-3704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058), PRK02627 (acetylornithine aminotransferase; Provisional), Ion_trans_2 (pfam07885), TrkA (COG0569)

Seq: VJOX01002027.1 (313 bp)
Overview 1 RT 1: 3-126 bp Neighborhood of RT #1 [3, 269] RVT-GII Feature: gene Location: 3-269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VJOX01001137.1 (3349 bp)
Overview 1 RT 1: 684-3135 bp Neighborhood of RT #1 [684, 3135] RVT_N RVT-GII McrA Feature: gene Location: 684-2231 bp Feature: domain Description: RVT_N Location: 720-960 bp Feature: domain Description: RVT_N Location: 720-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1017-1641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1017-1641 bp Feature: domain Description: McrA Location: 1875-2196 bp Feature: domain Description: McrA Location: 1875-2196 bp Feature: gene Location: 2507-2686 bp Feature: gene Location: 2764-3135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: VJOX01000065.1 (32223 bp)
Overview 1 RT 1: 10594-17938 bp Neighborhood of RT #1 [10594, 17973] ABC_cobalt_CbiO_domain1 RVT_N RVT-GII McrA COG4330 PpsA Feature: gene Location: 10594-11358 bp Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 10657-11275 bp Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 10657-11275 bp Feature: gene Location: 11527-12003 bp Feature: gene Location: 12893-14470 bp Feature: domain Description: RVT_N Location: 12929-13169 bp Feature: domain Description: RVT_N Location: 12929-13169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13226-13886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13226-13886 bp Feature: domain Description: McrA Location: 14120-14450 bp Feature: domain Description: McrA Location: 14120-14450 bp Feature: gene Location: 14874-15530 bp Feature: domain Description: COG4330 Location: 14877-15474 bp Feature: domain Description: COG4330 Location: 14877-15 474 bp Feature: gene Location: 15625-17973 bp Feature: domain Description: PpsA Location: 15631-17938 bp Feature: domain Description: PpsA Location: 15 631-17938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_cobalt_CbiO_domain1 (cd03225), RVT_N (pfam13655), RVT-GII, McrA (COG4058), COG4330 (Uncharacterized membrane protein ), PpsA (COG0574)

Seq: VJOX01001191.1 (1218 bp)
Overview 1 RT 1: 1-1218 bp Neighborhood of RT #1 [1, 1217] RVT-GII RVT-GII GIIM McrA Feature: gene Location: 1-186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-184 bp Feature: gene Location: 240-938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243-603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243-603 bp Feature: domain Description: GIIM Note: maturase Location: 687-915 bp Feature: domain Description: GIIM Note: maturase Location: 687-915 bp Feature: gene Location: 1005-1217 bp Feature: domain Description: McrA Location: 1014-1218 bp Feature: domain Description: McrA Location: 1014-1218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: VJOX01000676.1 (5519 bp)
Overview 1 RT 1: 1-5209 bp Neighborhood of RT #1 [1, 5209] PdxJ PGM_like2 RVT-GII GIIM HNH RVT_N RVT-GII Feature: gene Location: 1-723 bp Feature: domain Description: PdxJ Location: 10-715 bp Feature: domain Description: PdxJ Location: 10-715 bp Feature: gene Location: 1148-2584 bp Feature: domain Description: PGM_like2 Location: 1172-2576 bp Feature: domain Description: PGM_like2 Location: 117 2-2576 bp Feature: gene Location: 2781-4154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2787-3291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2787-3291 bp Feature: domain Description: GIIM Note: maturase Location: 3402-3606 bp Feature: domain Description: GIIM Note: maturase Location: 3402-3606 bp Feature: domain Description: HNH Note: nucleases Location: 3858-3990 bp Feature: domain Description: HNH Note: nucleases Location: 3858-3990 bp Feature: gene Location: 4136-4717 bp Feature: domain Description: RVT_N Location: 4220-4466 bp Feature: domain Description: RVT_N Location: 4220-4466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4508-4697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4508-4697 bp Feature: gene Location: 5039-5209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PdxJ (pfam03740), PGM_like2 (cd05800), RVT-GII, GIIM (pfam08388), HNH (pfam01844), RVT_N (pfam13655)

Seq: VJOX01002122.1 (332 bp)
Overview 1 RT 1: 59-269 bp Neighborhood of RT #1 [59, 331] RVT-GII Feature: gene Location: 59-331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191-269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191-269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII