myRT

myRT report for GCA_014325735.1_ASM1432573v1

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Seq: JAALOF010000006.1 (78624 bp)
Overview 1 RT 1: 27877-34077 bp Neighborhood of RT #1 [27877, 34077] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 27877-29103 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28480-29035 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 28480-29035 bp Feature: gene Location: 29692-31140 bp Feature: domain Description: COG2865 Location: 29698-31096 bp Feature: domain Description: COG2865 Location: 29698-31 096 bp Feature: gene Location: 31286-32782 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31694-32150 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31 694-321 50 bp Feature: gene Location: 32954-33190 bp Feature: domain Description: HTH_XRE Location: 32996-33182 bp Feature: domain Description: HTH_XRE Location: 32996-331 82 bp Feature: gene Location: 33304-34077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)

Seq: JAALOF010000111.1 (3473 bp)
Overview 1 RT 1: 93-2722 bp Neighborhood of RT #1 [93, 3384] HsdM RVT-AbiP2 Feature: gene Location: 93-1571 bp Feature: domain Description: HsdM Location: 114-1539 bp Feature: domain Description: HsdM Location: 114-1539 bp Feature: gene Location: 1909-3384 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2257-2722 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 57-2 72 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: JAALOF010000115.1 (2761 bp)
Overview 1 RT 1: 131-1922 bp Neighborhood of RT #1 [131, 2041] RVT-GII HNHc Feature: gene Location: 131-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)