myRT

myRT report for GCA_014325825.1_ASM1432582v1

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Seq: JAAIHA010000001.1 (146353 bp)
Overview 1 RT 1: 127985-133025 bp Neighborhood of RT #1 [127985, 133039] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 127985-128128 bp Feature: gene Location: 128221-129405 bp Feature: domain Description: HTH_XRE Location: 128251-128395 bp Feature: domain Description: HTH_XRE Location: 1 28251 -1 28395 bp Feature: domain Description: Rol_Rep_N Location: 128428-128692 bp Feature: domain Description: Rol_Rep_N Location: 1 28428-1 28692 bp Feature: domain Description: Rep_trans Location: 128716-129328 bp Feature: domain Description: Rep_trans Location: 1 2871 6-1 29328 bp Feature: gene Location: 130285-132195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130618-131356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3061 8-1 31 356 bp Feature: domain Description: HNHc Note: nucleases Location: 131911-132076 bp Feature: domain Description: HNHc Note: nucleases Location: 1 31 91 1 -1 32076 bp Feature: gene Location: 132383-132523 bp Feature: gene Location: 132536-133039 bp Feature: domain Description: ArdA Location: 132554-133025 bp Feature: domain Description: ArdA Location: 1 32554-1 33025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: JAAIHA010000082.1 (3476 bp)
Overview 1 RT 1: 90-3349 bp Neighborhood of RT #1 [90, 3381] RVT-AbiP2 HsdM Feature: gene Location: 90-1565 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 438-903 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 438-903 bp Feature: gene Location: 1903-3381 bp Feature: domain Description: HsdM Location: 1924-3349 bp Feature: domain Description: HsdM Location: 192 4-3349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)