myRT

myRT report for GCA_014325835.1_ASM1432583v1

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Seq: JAAIHB010000118.1 (1900 bp)
Overview 1 RT 1: 437-1646 bp Neighborhood of RT #1 [437, 1825] RVT-GII GIIM Feature: gene Location: 437-1825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1 373 bp Feature: domain Description: GIIM Note: maturase Location: 1430-1646 bp Feature: domain Description: GIIM Note: maturase Location: 1 430-1 646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAIHB010000107.1 (3475 bp)
Overview 1 RT 1: 90-3349 bp Neighborhood of RT #1 [90, 3381] RVT-AbiP2 HsdM Feature: gene Location: 90-1565 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 438-903 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 438-903 bp Feature: gene Location: 1903-3381 bp Feature: domain Description: HsdM Location: 1924-3349 bp Feature: domain Description: HsdM Location: 192 4-3349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: JAAIHB010000027.1 (35386 bp)
Overview 1 RT 1: 24032-29879 bp Neighborhood of RT #1 [24032, 29998] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 24032-25726 bp Feature: domain Description: VirB4 Location: 24350-25034 bp Feature: domain Description: VirB4 Location: 243 50-2503 4 bp Feature: gene Location: 25994-26227 bp Feature: gene Location: 26414-28291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26729-27467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26729-27467 bp Feature: domain Description: HNHc Note: nucleases Location: 28025-28178 bp Feature: domain Description: HNHc Note: nucleases Location: 28025-28178 bp Feature: gene Location: 28479-28799 bp Feature: gene Location: 28799-29998 bp Feature: domain Description: Glucosaminidase Location: 29069-29465 bp Feature: domain Description: Glucosaminidase Location: 29069-29465 bp Feature: domain Description: Peptidase_M23 Location: 29642-29879 bp Feature: domain Description: Peptidase_M23 Location: 29642-29879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)