myRT

myRT report for GCA_014325885.1_ASM1432588v1

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Seq: JAAIHC010000113.1 (3473 bp)
Overview 1 RT 1: 93-2722 bp Neighborhood of RT #1 [93, 3384] HsdM RVT-AbiP2 Feature: gene Location: 93-1571 bp Feature: domain Description: HsdM Location: 114-1539 bp Feature: domain Description: HsdM Location: 1 1 4-1 539 bp Feature: gene Location: 1909-3384 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2257-2722 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2257-2722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: JAAIHC010000120.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JAAIHC010000007.1 (78531 bp)
Overview 1 RT 1: 44455-50587 bp Neighborhood of RT #1 [44455, 50655] HTH_XRE RVT-AbiP2 COG2865 INT_ICEBs1_C_like Feature: gene Location: 44455-45228 bp Feature: gene Location: 45342-45578 bp Feature: domain Description: HTH_XRE Location: 45384-45570 bp Feature: domain Description: HTH_XRE Location: 453 84-45570 bp Feature: gene Location: 45750-47246 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 46158-46614 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 46158-46614 bp Feature: gene Location: 47392-48840 bp Feature: domain Description: COG2865 Location: 47398-48796 bp Feature: domain Description: COG2865 Location: 473 98-48796 bp Feature: gene Location: 49429-50655 bp Feature: domain Description: INT_ICEBs1_C_like Location: 50032-50587 bp Feature: domain Description: INT_ICEBs1_C_like Location: 5003 2-50587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-AbiP2, COG2865 (Predicted transcriptional regulator, contains HTH domain ), INT_ICEBs1_C_like (cd01189)