myRT

myRT report for GCA_014325925.1_ASM1432592v1

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Seq: JAAIHD010000124.1 (1900 bp)
Overview 1 RT 1: 76-1285 bp Neighborhood of RT #1 [76, 1464] RVT-GII GIIM Feature: gene Location: 76-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-1 01 2 bp Feature: domain Description: GIIM Note: maturase Location: 1069-1285 bp Feature: domain Description: GIIM Note: maturase Location: 1 069-1 285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAIHD010000111.1 (3475 bp)
Overview 1 RT 1: 95-2724 bp Neighborhood of RT #1 [95, 3386] HsdM RVT-AbiP2 Feature: gene Location: 95-1573 bp Feature: domain Description: HsdM Location: 116-1541 bp Feature: domain Description: HsdM Location: 116-1541 bp Feature: gene Location: 1911-3386 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2259-2724 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 59-2 72 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: JAAIHD010000022.1 (49004 bp)
Overview 1 RT 1: 18365-29270 bp Neighborhood of RT #1 [18365, 29284] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 18365-18709 bp Feature: domain Description: RelB_DinJ Location: 18575-18701 bp Feature: domain Description: RelB_DinJ Location: 18575-18701 bp Feature: gene Location: 18778-19794 bp Feature: domain Description: FtsK_SpoIIIE Location: 19435-19675 bp Feature: domain Description: FtsK_SpoIIIE Location: 1943 5-19675 bp Feature: gene Location: 20388-22262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20754-21450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20754-21450 bp Feature: domain Description: HNHc Note: nucleases Location: 21990-22149 bp Feature: domain Description: HNHc Note: nucleases Location: 21990-22149 bp Feature: gene Location: 22364-22744 bp Feature: domain Description: FtsK Location: 22379-22619 bp Feature: domain Description: FtsK Location: 223 79-22619 bp Feature: gene Location: 22789-23931 bp Feature: domain Description: Dcm Location: 22792-23905 bp Feature: domain Description: Dcm Location: 22792-23 905 bp Feature: gene Location: 24466-25650 bp Feature: domain Description: HTH_XRE Location: 24496-24640 bp Feature: domain Description: HTH_XRE Location: 24496-24640 bp Feature: domain Description: Rol_Rep_N Location: 24673-24937 bp Feature: domain Description: Rol_Rep_N Location: 24673 -2493 7 bp Feature: domain Description: Rep_trans Location: 24961-25573 bp Feature: domain Description: Rep_trans Location: 24961-25573 bp Feature: gene Location: 26530-28440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26863-27601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26863 -27601 bp Feature: domain Description: HNHc Note: nucleases Location: 28156-28321 bp Feature: domain Description: HNHc Note: nucleases Location: 28156-283 21 bp Feature: gene Location: 28628-28768 bp Feature: gene Location: 28781-29284 bp Feature: domain Description: ArdA Location: 28799-29270 bp Feature: domain Description: ArdA Location: 28799-29270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), ArdA (pfam07275)

Seq: JAAIHD010000028.1 (35386 bp)
Overview 1 RT 1: 24032-29879 bp Neighborhood of RT #1 [24032, 29998] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 24032-25726 bp Feature: domain Description: VirB4 Location: 24350-25034 bp Feature: domain Description: VirB4 Location: 24 350-25034 bp Feature: gene Location: 25994-26227 bp Feature: gene Location: 26414-28291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26729-27467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26729-274 67 bp Feature: domain Description: HNHc Note: nucleases Location: 28025-28178 bp Feature: domain Description: HNHc Note: nucleases Location: 28025-28178 bp Feature: gene Location: 28479-28799 bp Feature: gene Location: 28799-29998 bp Feature: domain Description: Glucosaminidase Location: 29069-29465 bp Feature: domain Description: Glucosaminidase Location: 29069-294 65 bp Feature: domain Description: Peptidase_M23 Location: 29642-29879 bp Feature: domain Description: Peptidase_M23 Location: 2964 2-29879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)