myRT

myRT report for GCA_014326245.1_ASM1432624v1

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Seq: JAAIHQ010000011.1 (71825 bp)
Overview 1 RT 1: 13311-18365 bp Neighborhood of RT #1 [13311, 18365] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 13311-13814 bp Feature: domain Description: ArdA Location: 13329-13800 bp Feature: domain Description: ArdA Location: 1 3329-1 3800 bp Feature: gene Location: 13816-14025 bp Feature: gene Location: 14155-16065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14488-15226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4488-1 5226 bp Feature: domain Description: HNHc Note: nucleases Location: 15781-15946 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5781 -1 5946 bp Feature: gene Location: 16945-18129 bp Feature: domain Description: HTH_XRE Location: 16975-17119 bp Feature: domain Description: HTH_XRE Location: 1 6975-1 71 1 9 bp Feature: domain Description: Rol_Rep_N Location: 17152-17416 bp Feature: domain Description: Rol_Rep_N Location: 1 71 52-1 741 6 bp Feature: domain Description: Rep_trans Location: 17440-18052 bp Feature: domain Description: Rep_trans Location: 1 7440-1 8052 bp Feature: gene Location: 18222-18365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: JAAIHQ010000006.1 (78895 bp)
Overview 1 RT 1: 28307-34507 bp Neighborhood of RT #1 [28307, 34507] INT_ICEBs1_C_like COG2865 RVT-AbiP2 HTH_XRE Feature: gene Location: 28307-29533 bp Feature: domain Description: INT_ICEBs1_C_like Location: 28910-29465 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 8910-2 9465 bp Feature: gene Location: 30122-31570 bp Feature: domain Description: COG2865 Location: 30128-31526 bp Feature: domain Description: COG2 865 Location: 3012 8-3152 6 bp Feature: gene Location: 31716-33212 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 32124-32580 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 32 12 4-32 580 bp Feature: gene Location: 33384-33620 bp Feature: domain Description: HTH_XRE Location: 33426-33612 bp Feature: domain Description: HTH_XRE Location: 3342 6-33612 bp Feature: gene Location: 33734-34507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-AbiP2, HTH_XRE (smart00530)