myRT

myRT report for GCA_014332555.1_ASM1433255v1

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Seq: VFSP01000060.1 (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1 1 56 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VFSP01000015.1 (119784 bp)
Overview 1 RT 1: 32101-38951 bp Neighborhood of RT #1 [32101, 38971] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32101-32766 bp Feature: domain Description: INT_P4_C Location: 32206-32764 bp Feature: domain Description: INT_P4_C Location: 32 2 06-32 764 bp Feature: gene Location: 33027-33467 bp Feature: domain Description: Integrase_1 Location: 33033-33249 bp Feature: domain Description: Integrase_1 Location: 33033-332 49 bp Feature: gene Location: 33524-35602 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33932-34376 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33932 -34376 bp Feature: gene Location: 35602-38211 bp Feature: domain Description: FimD Location: 35659-38200 bp Feature: domain Description: FimD Location: 35659-382 00 bp Feature: gene Location: 38243-38971 bp Feature: domain Description: FimC Location: 38276-38951 bp Feature: domain Description: FimC Location: 382 76-38951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VFSP01000002.1 (426522 bp)
Overview 1 RT 1: 25590-29847 bp Neighborhood of RT #1 [25590, 29861] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25590-26027 bp Feature: domain Description: PRK10724 Location: 25593-26022 bp Feature: domain Description: PRK10724 Location: 25593 -26022 bp Feature: gene Location: 26177-26659 bp Feature: domain Description: SmpB Location: 26207-26651 bp Feature: domain Description: SmpB Location: 26207-26651 bp Feature: gene Location: 27275-27574 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27278-27389 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27278-273 89 bp Feature: gene Location: 28017-28205 bp Feature: gene Location: 28761-29861 bp Feature: domain Description: D Location: 28767-29847 bp Feature: domain Description: D Location: 28767-29847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)