myRT

myRT report for GCA_014332635.1_ASM1433263v1

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Seq: VFSQ01000064.1 (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1 1 56 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VFSQ01000016.1 (119784 bp)
Overview 1 RT 1: 80814-87682 bp Neighborhood of RT #1 [80814, 87684] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 80814-81542 bp Feature: domain Description: FimC Location: 80847-81522 bp Feature: domain Description: FimC Location: 80847-8152 2 bp Feature: gene Location: 81574-84183 bp Feature: domain Description: FimD Location: 81631-84172 bp Feature: domain Description: FimD Location: 81631-84172 bp Feature: gene Location: 84183-86261 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 84591-85035 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 84591-85035 bp Feature: gene Location: 86318-86758 bp Feature: domain Description: Integrase_1 Location: 86324-86540 bp Feature: domain Description: Integrase_1 Location: 8632 4-86540 bp Feature: gene Location: 87019-87684 bp Feature: domain Description: INT_P4_C Location: 87124-87682 bp Feature: domain Description: INT_P4_C Location: 8712 4-87682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: VFSQ01000003.1 (426976 bp)
Overview 1 RT 1: 25590-29847 bp Neighborhood of RT #1 [25590, 29861] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25590-26027 bp Feature: domain Description: PRK10724 Location: 25593-26022 bp Feature: domain Description: PRK10724 Location: 25593 -26022 bp Feature: gene Location: 26177-26659 bp Feature: domain Description: SmpB Location: 26207-26651 bp Feature: domain Description: SmpB Location: 26207-26651 bp Feature: gene Location: 27275-27574 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27278-27389 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27278-273 89 bp Feature: gene Location: 28017-28205 bp Feature: gene Location: 28761-29861 bp Feature: domain Description: D Location: 28767-29847 bp Feature: domain Description: D Location: 28767-29847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)