myRT

myRT report for GCA_014349195.1_ASM1434919v1

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Seq: JACSOG010000027.1 (68073 bp)
Overview 1 RT 1: 33245-39554 bp Neighborhood of RT #1 [33245, 39742] Phage_int_SAM_2 Integrase_1 RVT-UG8 RVT-UG3 HTH_17 RepA_C Feature: gene Location: 33245-33457 bp Feature: gene Location: 33550-34410 bp Feature: domain Description: Phage_int_SAM_2 Location: 33553-33826 bp Feature: domain Description: Phage_int_SAM_2 Location: 33553-33826 bp Feature: domain Description: Integrase_1 Location: 33916-34243 bp Feature: domain Description: Integrase_1 Location: 3391 6-34243 bp Feature: gene Location: 34545-36611 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 35145-35607 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 351 45-35607 bp Feature: gene Location: 36611-37960 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 37061-37550 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 37061 -37550 bp Feature: gene Location: 38649-38876 bp Feature: domain Description: HTH_17 Location: 38673-38844 bp Feature: domain Description: HTH_1 7 Location: 38673-38844 bp Feature: gene Location: 38876-39742 bp Feature: domain Description: RepA_C Location: 39062-39554 bp Feature: domain Description: RepA_C Location: 39062-39554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), RVT-UG8, RVT-UG3, HTH_17 (pfam12728), RepA_C (pfam04796)

Seq: JACSOG010000008.1 (148915 bp)
Overview 1 RT 1: 68279-72215 bp Neighborhood of RT #1 [68279, 72262] SLATT_5 RVT-UG17 integrase_gron integrase_gron Feature: gene Location: 68279-68407 bp Feature: gene Location: 68989-69609 bp Feature: domain Description: SLATT_5 Location: 68995-69532 bp Feature: domain Description: SLATT_5 Location: 68995-69532 bp Feature: gene Location: 69612-70955 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 69843-70449 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 69843-70449 bp Feature: gene Location: 71051-71257 bp Feature: gene Location: 71456-72262 bp Feature: domain Description: integrase_gron Location: 71468-71990 bp Feature: domain Description: integrase_gron Location: 71468-71990 bp Feature: domain Description: integrase_gron Location: 72047-72215 bp Feature: domain Description: integrase_gron Location: 72 047-72 2 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, integrase_gron (TIGR02249)