myRT

myRT report for GCA_014379175.1_ASM1437917v1

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Seq: JACMMH010001290.1 (2957 bp)
Overview 1 RT 1: 2-2200 bp Neighborhood of RT #1 [2, 2367] RVT-CRISPR GIIM Cas_Cas1 Feature: gene Location: 2-1282 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 149-761 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 49-761 bp Feature: domain Description: GIIM Note: maturase Location: 851-1028 bp Feature: domain Description: GIIM Note: maturase Location: 851 -1 028 bp Feature: gene Location: 1294-2367 bp Feature: domain Description: Cas_Cas1 Location: 1378-2200 bp Feature: domain Description: Cas_Cas1 Location: 1 378-2200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), Cas_Cas1 (pfam01867)

Seq: JACMMH010001687.1 (2396 bp)
Overview 1 RT 1: 3-2365 bp Neighborhood of RT #1 [3, 2394] RVT-Retrons GAT1_cyanophycinase Feature: gene Location: 3-422 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9-189 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9-189 bp Feature: gene Location: 525-1256 bp Feature: gene Location: 1543-2394 bp Feature: domain Description: GAT1_cyanophycinase Location: 1669-2365 bp Feature: domain Description: GAT1_cyanophycinase Location: 1669-2 365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, GAT1_cyanophycinase (cd03145)

Seq: JACMMH010001093.1 (4401 bp)
Overview 1 RT 1: 3-3564 bp Neighborhood of RT #1 [3, 3575] CRISPR_Cas6 RVT-CRISPR CTP_transf_1 UppS Feature: gene Location: 3-1865 bp Feature: domain Description: CRISPR_Cas6 Location: 465-828 bp Feature: domain Description: CRISPR_Cas6 Location: 465-828 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1026-1587 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1026-1587 bp Feature: gene Location: 1878-2798 bp Feature: domain Description: CTP_transf_1 Location: 1914-2787 bp Feature: domain Description: CTP_transf_1 Location: 1914-2787 bp Feature: gene Location: 2805-3575 bp Feature: domain Description: UppS Location: 2868-3564 bp Feature: domain Description: UppS Location: 2868-3 564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), RVT-CRISPR, CTP_transf_1 (pfam01148), UppS (COG0020)