myRT

myRT report for GCA_014380625.1_ASM1438062v1

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Seq: JACMJL010000027.1 (15962 bp)
Overview 1 RT 1: 310-4440 bp Neighborhood of RT #1 [310, 4595] RVT-GII HNHc YycJ-like_MBL-fold RecT Feature: gene Location: 310-525 bp Feature: gene Location: 731-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052-1751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 052-1 751 bp Feature: domain Description: HNHc Note: nucleases Location: 2285-2441 bp Feature: domain Description: HNHc Note: nucleases Location: 2285-2441 bp Feature: gene Location: 3277-3708 bp Feature: domain Description: YycJ-like_MBL-fold Location: 3292-3685 bp Feature: domain Description: YycJ-like_MBL-fold Location: 3292-3685 bp Feature: gene Location: 3708-4595 bp Feature: domain Description: RecT Location: 3834-4440 bp Feature: domain Description: RecT Location: 3834-4440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), YycJ-like_MBL-fold (cd07733), RecT (pfam03837)

Seq: JACMJL010000131.1 (35715 bp)
Overview 1 RT 1: 25382-33439 bp Neighborhood of RT #1 [25382, 34005] bZIP_Maf RVT-Retrons COG3682 Peptidase_M56 Feature: gene Location: 25382-28381 bp Feature: gene Location: 28378-30186 bp Feature: domain Description: bZIP_Maf Location: 28618-28777 bp Feature: domain Description: bZIP_Maf Location: 2 8618-2 8777 bp Feature: gene Location: 30183-31664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30819-31440 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30819-31440 bp Feature: gene Location: 32111-32494 bp Feature: domain Description: COG3682 Location: 32126-32486 bp Feature: domain Description: COG3682 Location: 32 12 6-32 486 bp Feature: gene Location: 32500-34005 bp Feature: domain Description: Peptidase_M56 Location: 32530-33439 bp Feature: domain Description: Peptidase_M56 Location: 32 530-33439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bZIP_Maf (pfam03131), RVT-Retrons, COG3682 (Predicted transcriptional regulator ), Peptidase_M56 (pfam05569)

Seq: JACMJL010000097.1 (23180 bp)
Overview 1 RT 1: 12183-17166 bp Neighborhood of RT #1 [12183, 17177] Peptidase_C92 RVT-GII FhlA GGDEF butyr_kinase Feature: gene Location: 12183-12398 bp Feature: gene Location: 12825-14075 bp Feature: domain Description: Peptidase_C92 Location: 13371-13890 bp Feature: domain Description: Peptidase_C92 Location: 13 3 71-13 890 bp Feature: gene Location: 14517-14834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14673-14805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14673 -14805 bp Feature: gene Location: 15014-15850 bp Feature: domain Description: FhlA Location: 15119-15437 bp Feature: domain Description: FhlA Location: 15119-1543 7 bp Feature: domain Description: GGDEF Location: 15440-15575 bp Feature: domain Description: GGDEF Location: 15440-15575 bp Feature: gene Location: 16107-17177 bp Feature: domain Description: butyr_kinase Location: 16119-17166 bp Feature: domain Description: butyr_kinase Location: 16119-17166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C92 (pfam05708), RVT-GII, FhlA (COG3604), GGDEF (TIGR00254), butyr_kinase (TIGR02707)