myRT

myRT report for GCA_014381825.1_ASM1438182v1

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Seq: JACNKX010000040.1 (11609 bp)
Overview 1 RT 1: 5074-10457 bp Neighborhood of RT #1 [5074, 10457] Sig-70_gvs1 RVT-GII RVT-GII SASA AmpC Feature: gene Location: 5074-5613 bp Feature: domain Description: Sig-70_gvs1 Location: 5122-5587 bp Feature: domain Description: Sig-70_gvs1 Location: 51 22-5587 bp Feature: gene Location: 6003-6242 bp Feature: gene Location: 6422-7231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6710-7058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 671 0-7058 bp Feature: gene Location: 7164-7502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7206-7389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7206-7389 bp Feature: gene Location: 7516-10029 bp Feature: domain Description: SASA Location: 7672-8263 bp Feature: domain Description: SASA Location: 7672-8263 bp Feature: domain Description: AmpC Location: 9094-9955 bp Feature: domain Description: AmpC Location: 9094-9955 bp Feature: gene Location: 10278-10457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sig-70_gvs1 (TIGR02989), RVT-GII, SASA (pfam03629), AmpC (COG1680)

Seq: JACNKX010000198.1 (79399 bp)
Overview 1 RT 1: 74412-76707 bp Neighborhood of RT #1 [74412, 79397] AmpC RVT-UG1 Feature: gene Location: 74412-75284 bp Feature: domain Description: AmpC Location: 74469-75276 bp Feature: domain Description: AmpC Location: 74469-752 76 bp Feature: gene Location: 75339-75548 bp Feature: gene Location: 75714-79397 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 76230-76707 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 762 30-76707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmpC (COG1680), RVT-UG1

Seq: JACNKX010000236.1 (50057 bp)
Overview 1 RT 1: 618-5268 bp Neighborhood of RT #1 [618, 5294] HXXSHH RVT-GII GIIM YhcF Feature: gene Location: 618-1877 bp Feature: domain Description: HXXSHH Location: 738-1581 bp Feature: domain Description: HXXSHH Location: 73 8-1581 bp Feature: gene Location: 2093-2236 bp Feature: gene Location: 2260-3921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2836-3526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283 6-3 526 bp Feature: domain Description: GIIM Note: maturase Location: 3604-3820 bp Feature: domain Description: GIIM Note: maturase Location: 3 604-3 820 bp Feature: gene Location: 4542-4769 bp Feature: gene Location: 4905-5294 bp Feature: domain Description: YhcF Location: 4914-5268 bp Feature: domain Description: YhcF Location: 4914-5268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HXXSHH (pfam07586), RVT-GII, GIIM (pfam08388), YhcF (COG1725)