myRT

myRT report for GCA_014382865.1_ASM1438286v1

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Seq: JACNIX010000179.1 (4074 bp)
Overview 1 RT 1: 1-4073 bp Neighborhood of RT #1 [1, 4073] RVT-GII GIIM HisB1 Feature: gene Location: 1-396 bp Feature: gene Location: 579-794 bp Feature: gene Location: 1113-2390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1398-2028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 398-2028 bp Feature: domain Description: GIIM Note: maturase Location: 2103-2322 bp Feature: domain Description: GIIM Note: maturase Location: 21 03-2322 bp Feature: gene Location: 2715-3263 bp Feature: domain Description: HisB1 Location: 2727-3195 bp Feature: domain Description: HisB1 Location: 2727-31 95 bp Feature: gene Location: 3351-4073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HisB1 (COG0241)

Seq: JACNIX010000116.1 (15011 bp)
Overview 1 RT 1: 3587-13109 bp Neighborhood of RT #1 [3587, 13123] hsdR RMtype1_S_StySKI-TRD2-CR2_like RMtype1_S_StySKI-TRD2-CR2_like RVT-UG9 COG2865 HsdM Feature: gene Location: 3587-6589 bp Feature: domain Description: hsdR Location: 3602-5660 bp Feature: domain Description: hsdR Location: 3602 -5660 bp Feature: gene Location: 6591-7793 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 6939-7131 bp Feature: domain Description: RMtype1_S_StySKI-TRD2 -CR2 _like Location: 6939-7131 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 7206-7752 bp Feature: domain Description: RMtype1_S_StySKI-TRD2 -CR2 _like Location: 72 06-7752 bp Feature: gene Location: 7878-9482 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 8079-8694 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 8079-8694 bp Feature: gene Location: 9595-10779 bp Feature: domain Description: COG2865 Location: 9613-10768 bp Feature: domain Description: COG2 865 Location: 9613-10768 bp Feature: gene Location: 11336-13123 bp Feature: domain Description: HsdM Location: 11609-13109 bp Feature: domain Description: HsdM Location: 11609-13109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hsdR (TIGR00348), RMtype1_S_StySKI-TRD2-CR2_like (cd17259), RVT-UG9, COG2865 (Predicted transcriptional regulator, contains HTH domain ), HsdM (COG0286)

Seq: JACNIX010000170.1 (27501 bp)
Overview 1 RT 1: 433-4146 bp Neighborhood of RT #1 [433, 4151] RVT-GII GIIM tig clpP Feature: gene Location: 433-1833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-1393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-13 93 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1660 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1660 bp Feature: gene Location: 2118-3539 bp Feature: domain Description: tig Location: 2160-3411 bp Feature: domain Description: tig Location: 2160-3 411 bp Feature: gene Location: 3561-4151 bp Feature: domain Description: clpP Location: 3570-4146 bp Feature: domain Description: clpP Location: 3 570-4146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), tig (TIGR00115), clpP