myRT

myRT report for GCA_014383215.1_ASM1438321v1

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Seq: JACNIG010000423.1 (4808 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1469] RVT-GII GIIM ParE ParD_antitoxin Feature: gene Location: 3-764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39-306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39-306 bp Feature: domain Description: GIIM Note: maturase Location: 381-597 bp Feature: domain Description: GIIM Note: maturase Location: 381 -597 bp Feature: gene Location: 886-1182 bp Feature: domain Description: ParE Location: 889-1177 bp Feature: domain Description: ParE Location: 889-1 1 77 bp Feature: gene Location: 1185-1469 bp Feature: domain Description: ParD_antitoxin Location: 1230-1464 bp Feature: domain Description: ParD_antitoxin Location: 1 230-1 464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ParE (COG3668), ParD_antitoxin (pfam03693)

Seq: JACNIG010000243.1 (29916 bp)
Overview 1 RT 1: 184-6468 bp Neighborhood of RT #1 [184, 6737] RVT-GII ParB HTH_11 N6_N4_Mtase N6_N4_Mtase UvrD UvrD Cas4_I-A_I-B_I-C_I-D_II-B RecB Feature: gene Location: 184-873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-493 bp Feature: gene Location: 1164-2576 bp Feature: domain Description: ParB Location: 1188-1422 bp Feature: domain Description: ParB Location: 1188-142 2 bp Feature: domain Description: HTH_11 Location: 1515-1614 bp Feature: domain Description: HTH_11 Location: 1515-1614 bp Feature: domain Description: N6_N4_Mtase Location: 1758-2097 bp Feature: domain Description: N6_N4_Mtase Location: 1758-2 097 bp Feature: domain Description: N6_N4_Mtase Location: 2184-2409 bp Feature: domain Description: N6_N4_Mtase Location: 2 184-2 409 bp Feature: gene Location: 3582-6737 bp Feature: domain Description: UvrD Location: 3621-4995 bp Feature: domain Description: UvrD Location: 362 1-4995 bp Feature: domain Description: UvrD Location: 5490-5805 bp Feature: domain Description: UvrD Location: 5490-5805 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 5919-6087 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 5919-6087 bp Feature: domain Description: RecB Location: 6255-6468 bp Feature: domain Description: RecB Location: 62 55-6468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ParB (smart00470), HTH_11 (pfam08279), N6_N4_Mtase (pfam01555), UvrD (COG0210), Cas4_I-A_I-B_I-C_I-D_II-B (cl00641), RecB (COG4998)

Seq: JACNIG010000339.1 (3306 bp)
Overview 1 RT 1: 2-2578 bp Neighborhood of RT #1 [2, 2586] Y1_Tnp RVT-GII YfmG Feature: gene Location: 2-712 bp Feature: domain Description: Y1_Tnp Location: 41-371 bp Feature: domain Description: Y1_Tnp Location: 41-3 71 bp Feature: gene Location: 758-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1193-1310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1193 -13 10 bp Feature: gene Location: 1346-1642 bp Feature: gene Location: 1882-2586 bp Feature: domain Description: YfmG Location: 1891-2578 bp Feature: domain Description: YfmG Location: 1891-2578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), RVT-GII, YfmG (COG1262)

Seq: JACNIG010000056.1 (9509 bp)
Overview 1 RT 1: 5348-9311 bp Neighborhood of RT #1 [5348, 9481] HigB-like_toxin VapI RVT-GII AAA_21 Feature: gene Location: 5348-5626 bp Feature: domain Description: HigB-like_toxin Location: 5360-5624 bp Feature: domain Description: HigB-like_toxin Location: 5360-5624 bp Feature: gene Location: 5638-5922 bp Feature: domain Description: VapI Location: 5644-5908 bp Feature: domain Description: VapI Location: 564 4 -5908 bp Feature: gene Location: 6206-7687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6626-7316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6626-7316 bp Feature: gene Location: 8210-9481 bp Feature: domain Description: AAA_21 Location: 8357-9311 bp Feature: domain Description: AAA_21 Location: 8357-9311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB-like_toxin (pfam05015), VapI (COG3093), RVT-GII, AAA_21 (pfam13304)